Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 U85056.1-201ENST00000616429 682 ntBASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CHTOPQ9Y3Y2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 AC074183.2-201ENST00000623112 922 ntBASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.4□□□□□ -0.1
CHTOPQ9Y3Y2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 KRT18P60-201ENST00000312876 1297 ntBASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 PKD1P1-201ENST00000458669 6805 ntBASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CHTOPQ9Y3Y2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.38□□□□□ -0.11
CHTOPQ9Y3Y2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms