Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.58■■□□□ 1.05
SIX4Q9UIU6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SIX4Q9UIU6 AL162377.1-201ENST00000618844 1793 ntBASIC21.58■■□□□ 1.04
SIX4Q9UIU6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIX4Q9UIU6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIX4Q9UIU6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIX4Q9UIU6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIX4Q9UIU6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.58■■□□□ 1.04
SIX4Q9UIU6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 KRT8P17-201ENST00000453110 1448 ntBASIC21.57■■□□□ 1.04
SIX4Q9UIU6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIX4Q9UIU6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 AL390719.1-204ENST00000412397 1219 ntBASIC21.56■■□□□ 1.04
SIX4Q9UIU6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 AC008687.6-201ENST00000596318 630 ntBASIC21.56■■□□□ 1.04
SIX4Q9UIU6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIX4Q9UIU6 KRT8P20-201ENST00000423953 1409 ntBASIC21.55■■□□□ 1.04
SIX4Q9UIU6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 FAM201B-201ENST00000458407 597 ntBASIC21.55■■□□□ 1.04
SIX4Q9UIU6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 AC120498.8-201ENST00000614275 531 ntBASIC21.55■■□□□ 1.04
SIX4Q9UIU6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SIX4Q9UIU6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 AC233263.1-201ENST00000578059 224 ntBASIC21.54■■□□□ 1.04
SIX4Q9UIU6 AC006058.3-201ENST00000606217 1069 ntBASIC21.54■■□□□ 1.04
SIX4Q9UIU6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIX4Q9UIU6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 ITM2C-210ENST00000620962 501 ntBASIC21.53■■□□□ 1.04
SIX4Q9UIU6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIX4Q9UIU6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms