Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CUEDC1Q9NWM3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CUEDC1Q9NWM3 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 MYC-209ENST00000641252 345 ntBASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CUEDC1Q9NWM3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CUEDC1Q9NWM3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 AC083880.1-201ENST00000608266 535 ntBASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CUEDC1Q9NWM3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.42■□□□□ 0.7
CUEDC1Q9NWM3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 LINC01521-201ENST00000504184 1943 ntBASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 AC097658.1-201ENST00000475555 843 ntBASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUEDC1Q9NWM3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.4■□□□□ 0.7
CUEDC1Q9NWM3 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms