Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RLIMQ9NVW2 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 KRT8P36-201ENST00000489121 1440 ntBASIC18.72■□□□□ 0.59
RLIMQ9NVW2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RLIMQ9NVW2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 AL591742.1-201ENST00000604433 565 ntBASIC18.71■□□□□ 0.59
RLIMQ9NVW2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RLIMQ9NVW2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RLIMQ9NVW2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.71■□□□□ 0.58
RLIMQ9NVW2 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 KRT18P11-201ENST00000435214 1283 ntBASIC18.7■□□□□ 0.58
RLIMQ9NVW2 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 MFSD11-216ENST00000590393 1141 ntBASIC18.7■□□□□ 0.58
RLIMQ9NVW2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.7■□□□□ 0.58
RLIMQ9NVW2 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RLIMQ9NVW2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 AC016769.1-201ENST00000409132 1010 ntBASIC18.69■□□□□ 0.58
RLIMQ9NVW2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 AC016405.3-201ENST00000607710 860 ntBASIC18.69■□□□□ 0.58
RLIMQ9NVW2 FAM21FP-204ENST00000608637 956 ntBASIC18.69■□□□□ 0.58
RLIMQ9NVW2 AC011767.1-201ENST00000617410 1153 ntBASIC18.69■□□□□ 0.58
RLIMQ9NVW2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RLIMQ9NVW2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RLIMQ9NVW2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms