Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 MIR4785-201ENST00000585005 73 ntBASIC20.8■□□□□ 0.92
TDP1Q9NUW8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.8■□□□□ 0.92
TDP1Q9NUW8 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
TDP1Q9NUW8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 PTBP1P-201ENST00000554374 1601 ntBASIC20.79■□□□□ 0.92
TDP1Q9NUW8 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 KRT16P5-201ENST00000455284 522 ntBASIC20.79■□□□□ 0.92
TDP1Q9NUW8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 AL121603.2-201ENST00000557373 2117 ntBASIC20.79■□□□□ 0.92
TDP1Q9NUW8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 NBPF21P-201ENST00000425093 1451 ntBASIC20.79■□□□□ 0.92
TDP1Q9NUW8 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TDP1Q9NUW8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 BX088651.1-201ENST00000540551 451 ntBASIC20.78■□□□□ 0.92
TDP1Q9NUW8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.78■□□□□ 0.92
TDP1Q9NUW8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 AF106564.1-201ENST00000607058 2553 ntBASIC20.77■□□□□ 0.92
TDP1Q9NUW8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 AC211429.1-201ENST00000415277 523 ntBASIC20.77■□□□□ 0.92
TDP1Q9NUW8 ECEL1P3-201ENST00000427961 737 ntBASIC20.77■□□□□ 0.92
TDP1Q9NUW8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TDP1Q9NUW8 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TDP1Q9NUW8 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TDP1Q9NUW8 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TDP1Q9NUW8 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TDP1Q9NUW8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TDP1Q9NUW8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TDP1Q9NUW8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.76■□□□□ 0.91
TDP1Q9NUW8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms