Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHB16Q9NRJ7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 CCDC92B-201ENST00000575506 885 ntBASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHB16Q9NRJ7 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHB16Q9NRJ7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 AC123595.1-201ENST00000440769 1046 ntBASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 MIR2861-201ENST00000636310 90 ntBASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 AC018445.3-201ENST00000624177 1945 ntBASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHB16Q9NRJ7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AC120498.9-201ENST00000339021 3867 ntBASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AP001160.3-201ENST00000601484 763 ntBASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHB16Q9NRJ7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHB16Q9NRJ7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms