Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH23Q9H251 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH23Q9H251 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 AC004264.1-201ENST00000608354 794 ntBASIC21.55■■□□□ 1.04
CDH23Q9H251 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.55■■□□□ 1.04
CDH23Q9H251 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.55■■□□□ 1.04
CDH23Q9H251 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.55■■□□□ 1.04
CDH23Q9H251 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 AC139887.4-201ENST00000607877 719 ntBASIC21.55■■□□□ 1.04
CDH23Q9H251 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.55■■□□□ 1.04
CDH23Q9H251 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.55■■□□□ 1.04
CDH23Q9H251 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH23Q9H251 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH23Q9H251 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH23Q9H251 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 AC005332.1-201ENST00000577698 1310 ntBASIC21.54■■□□□ 1.04
CDH23Q9H251 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH23Q9H251 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDH23Q9H251 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH23Q9H251 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH23Q9H251 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH23Q9H251 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH23Q9H251 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH23Q9H251 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH23Q9H251 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH23Q9H251 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH23Q9H251 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH23Q9H251 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDH23Q9H251 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDH23Q9H251 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH23Q9H251 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.53■■□□□ 1.04
CDH23Q9H251 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH23Q9H251 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.53■■□□□ 1.04
CDH23Q9H251 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH23Q9H251 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH23Q9H251 GPALPP1-207ENST00000611650 899 ntBASIC21.53■■□□□ 1.04
CDH23Q9H251 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH23Q9H251 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CDH23Q9H251 LIN28AP1-201ENST00000429574 405 ntBASIC21.52■■□□□ 1.04
CDH23Q9H251 AC091390.4-202ENST00000476426 537 ntBASIC21.52■■□□□ 1.04
CDH23Q9H251 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH23Q9H251 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CDH23Q9H251 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 YBX1P2-201ENST00000489612 999 ntBASIC21.52■■□□□ 1.04
CDH23Q9H251 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH23Q9H251 SLC25A1P4-201ENST00000567977 778 ntBASIC21.52■■□□□ 1.04
CDH23Q9H251 AC026271.3-201ENST00000571884 352 ntBASIC21.52■■□□□ 1.04
CDH23Q9H251 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH23Q9H251 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.51■■□□□ 1.03
CDH23Q9H251 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.51■■□□□ 1.03
CDH23Q9H251 AC246785.2-201ENST00000432512 513 ntBASIC21.51■■□□□ 1.03
CDH23Q9H251 KRT18P16-201ENST00000510337 1294 ntBASIC21.51■■□□□ 1.03
CDH23Q9H251 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CDH23Q9H251 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CDH23Q9H251 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.51■■□□□ 1.03
CDH23Q9H251 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
CDH23Q9H251 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 FAM86EP-206ENST00000510506 987 ntBASIC21.51■■□□□ 1.03
CDH23Q9H251 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CDH23Q9H251 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 AL121829.2-201ENST00000620908 328 ntBASIC21.51■■□□□ 1.03
CDH23Q9H251 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.51■■□□□ 1.03
CDH23Q9H251 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH23Q9H251 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH23Q9H251 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH23Q9H251 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH23Q9H251 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDH23Q9H251 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH23Q9H251 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH23Q9H251 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms