Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
KRTAP4-4Q9BYR3 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 RN7SKP74-201ENST00000362849 309 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CD48-202ENST00000368046 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 KRT18P50-201ENST00000404337 1243 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC009110.1-201ENST00000415422 558 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 IP6K2-208ENST00000417896 1124 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC012506.2-201ENST00000426527 533 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 RRM2P4-201ENST00000441721 562 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC099063.2-201ENST00000446360 662 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC02515-201ENST00000503677 536 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 COL6A4P2-205ENST00000509855 506 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC009630.1-201ENST00000523081 559 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC091820.1-201ENST00000523497 648 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC103996.2-201ENST00000556763 915 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 MTND3P12-201ENST00000559068 328 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC009119.1-203ENST00000565064 577 ntTSL 4 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC009005.1-202ENST00000588908 625 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 EAF1-AS1-205ENST00000595975 892 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 SNX6P1-201ENST00000601728 1224 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AP003117.2-201ENST00000606010 545 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AP003392.5-201ENST00000607857 415 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC245008.1-201ENST00000608123 476 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AP000322.2-201ENST00000608289 510 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC108673.2-201ENST00000608909 565 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC107905.1-201ENST00000616204 426 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC022558.3-201ENST00000616598 688 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AL122125.1-201ENST00000616999 600 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AL161645.1-201ENST00000622716 1255 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC009169.1-201ENST00000563784 1377 ntBASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CSRP3-202ENST00000533783 1456 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC4.21□□□□□ -1.74
KRTAP4-4Q9BYR3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms