Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 KRT8P17-201ENST00000453110 1448 ntBASIC21.15■□□□□ 0.98
SMOQ99835 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.15■□□□□ 0.98
SMOQ99835 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.15■□□□□ 0.98
SMOQ99835 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.15■□□□□ 0.98
SMOQ99835 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.15■□□□□ 0.98
SMOQ99835 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.15■□□□□ 0.98
SMOQ99835 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.15■□□□□ 0.98
SMOQ99835 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SMOQ99835 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMOQ99835 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMOQ99835 KRT8P20-201ENST00000423953 1409 ntBASIC21.14■□□□□ 0.98
SMOQ99835 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SMOQ99835 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SMOQ99835 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMOQ99835 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMOQ99835 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.14■□□□□ 0.97
SMOQ99835 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SMOQ99835 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.14■□□□□ 0.97
SMOQ99835 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMOQ99835 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SMOQ99835 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMOQ99835 KRT17P3-201ENST00000420566 1262 ntBASIC21.14■□□□□ 0.97
SMOQ99835 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.14■□□□□ 0.97
SMOQ99835 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SMOQ99835 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.14■□□□□ 0.97
SMOQ99835 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SMOQ99835 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.14■□□□□ 0.97
SMOQ99835 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.14■□□□□ 0.97
SMOQ99835 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMOQ99835 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SMOQ99835 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SMOQ99835 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.14■□□□□ 0.97
SMOQ99835 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.13■□□□□ 0.97
SMOQ99835 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.13■□□□□ 0.97
SMOQ99835 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SMOQ99835 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SMOQ99835 AC098590.1-201ENST00000468126 897 ntBASIC21.13■□□□□ 0.97
SMOQ99835 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.13■□□□□ 0.97
SMOQ99835 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.13■□□□□ 0.97
SMOQ99835 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SMOQ99835 AC069544.1-201ENST00000609399 999 ntBASIC21.13■□□□□ 0.97
SMOQ99835 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
SMOQ99835 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SMOQ99835 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.12■□□□□ 0.97
SMOQ99835 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
SMOQ99835 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 HLA-G-202ENST00000376815 851 ntBASIC21.12■□□□□ 0.97
SMOQ99835 HLA-G-203ENST00000376818 1127 ntBASIC21.12■□□□□ 0.97
SMOQ99835 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.12■□□□□ 0.97
SMOQ99835 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.12■□□□□ 0.97
SMOQ99835 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.12■□□□□ 0.97
SMOQ99835 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 AC124283.5-201ENST00000624661 1809 ntBASIC21.12■□□□□ 0.97
SMOQ99835 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SMOQ99835 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SMOQ99835 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SMOQ99835 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 RPS2P52-201ENST00000469610 820 ntBASIC21.11■□□□□ 0.97
SMOQ99835 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SMOQ99835 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.11■□□□□ 0.97
SMOQ99835 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.11■□□□□ 0.97
SMOQ99835 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.11■□□□□ 0.97
SMOQ99835 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms