Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.21■□□□□ 0.67
BARD1Q99728 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
BARD1Q99728 AL162412.1-201ENST00000567129 965 ntBASIC19.21■□□□□ 0.67
BARD1Q99728 AC069236.1-201ENST00000604339 616 ntBASIC19.21■□□□□ 0.67
BARD1Q99728 AC083880.1-201ENST00000608266 535 ntBASIC19.21■□□□□ 0.67
BARD1Q99728 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.21■□□□□ 0.67
BARD1Q99728 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BARD1Q99728 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.2■□□□□ 0.66
BARD1Q99728 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.2■□□□□ 0.66
BARD1Q99728 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BARD1Q99728 AC008694.1-202ENST00000636953 945 ntBASIC19.2■□□□□ 0.66
BARD1Q99728 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.2■□□□□ 0.66
BARD1Q99728 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
BARD1Q99728 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.19■□□□□ 0.66
BARD1Q99728 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.19■□□□□ 0.66
BARD1Q99728 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.19■□□□□ 0.66
BARD1Q99728 AC098590.1-201ENST00000468126 897 ntBASIC19.19■□□□□ 0.66
BARD1Q99728 AC016405.3-201ENST00000607710 860 ntBASIC19.19■□□□□ 0.66
BARD1Q99728 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.19■□□□□ 0.66
BARD1Q99728 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.19■□□□□ 0.66
BARD1Q99728 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BARD1Q99728 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
BARD1Q99728 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.18■□□□□ 0.66
BARD1Q99728 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.18■□□□□ 0.66
BARD1Q99728 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.18■□□□□ 0.66
BARD1Q99728 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.18■□□□□ 0.66
BARD1Q99728 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.18■□□□□ 0.66
BARD1Q99728 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.18■□□□□ 0.66
BARD1Q99728 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.18■□□□□ 0.66
BARD1Q99728 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
BARD1Q99728 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.18■□□□□ 0.66
BARD1Q99728 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
BARD1Q99728 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BARD1Q99728 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
BARD1Q99728 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.17■□□□□ 0.66
BARD1Q99728 RPS2P52-201ENST00000469610 820 ntBASIC19.17■□□□□ 0.66
BARD1Q99728 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.17■□□□□ 0.66
BARD1Q99728 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.17■□□□□ 0.66
BARD1Q99728 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
BARD1Q99728 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.17■□□□□ 0.66
BARD1Q99728 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BARD1Q99728 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.17■□□□□ 0.66
BARD1Q99728 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms