Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDK5RAP2Q96SN8 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 RARRES2P10-201ENST00000564312 460 ntBASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
CDK5RAP2Q96SN8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 MIR718-201ENST00000390190 70 ntBASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 TSPY7P-201ENST00000431358 1114 ntBASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 PENK-204ENST00000518770 863 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 AC233702.5-201ENST00000584107 538 ntBASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDK5RAP2Q96SN8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 AC113410.3-201ENST00000623366 203 ntBASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDK5RAP2Q96SN8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 PNN-205ENST00000556530 601 ntTSL 2 BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 KRT8P20-201ENST00000423953 1409 ntBASIC23.83■■□□□ 1.4
CDK5RAP2Q96SN8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 DPP3P2-201ENST00000416030 1696 ntBASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC23.82■■□□□ 1.4
CDK5RAP2Q96SN8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 KRT16P5-201ENST00000455284 522 ntBASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDK5RAP2Q96SN8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDK5RAP2Q96SN8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms