Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DUX3Q96PT4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DUX3Q96PT4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 AC026310.3-201ENST00000625186 2373 ntBASIC15.63■□□□□ 0.09
DUX3Q96PT4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DUX3Q96PT4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
DUX3Q96PT4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
DUX3Q96PT4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.62■□□□□ 0.09
DUX3Q96PT4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.62■□□□□ 0.09
DUX3Q96PT4 C1QBPP2-201ENST00000528754 825 ntBASIC15.62■□□□□ 0.09
DUX3Q96PT4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.62■□□□□ 0.09
DUX3Q96PT4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.62■□□□□ 0.09
DUX3Q96PT4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 AC005229.4-201ENST00000610085 2198 ntBASIC15.62■□□□□ 0.09
DUX3Q96PT4 PLK5-205ENST00000642079 1969 ntBASIC15.62■□□□□ 0.09
DUX3Q96PT4 AC027702.1-201ENST00000563810 1770 ntBASIC15.62■□□□□ 0.09
DUX3Q96PT4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DUX3Q96PT4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 KRT17P3-201ENST00000420566 1262 ntBASIC15.61■□□□□ 0.09
DUX3Q96PT4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
DUX3Q96PT4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
DUX3Q96PT4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 FAM197Y4-202ENST00000622692 608 ntBASIC15.6■□□□□ 0.09
DUX3Q96PT4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.6■□□□□ 0.09
DUX3Q96PT4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
DUX3Q96PT4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms