Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CFAP53Q96M91 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP53Q96M91 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP53Q96M91 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.93■■□□□ 1.9
CFAP53Q96M91 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.93■■□□□ 1.9
CFAP53Q96M91 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP53Q96M91 AC006058.3-201ENST00000606217 1069 ntBASIC26.93■■□□□ 1.9
CFAP53Q96M91 ITM2C-210ENST00000620962 501 ntBASIC26.93■■□□□ 1.9
CFAP53Q96M91 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CFAP53Q96M91 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC26.93■■□□□ 1.9
CFAP53Q96M91 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CFAP53Q96M91 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 KRT8P17-201ENST00000453110 1448 ntBASIC26.92■■□□□ 1.9
CFAP53Q96M91 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
CFAP53Q96M91 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CFAP53Q96M91 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC26.91■■□□□ 1.9
CFAP53Q96M91 KRT18P29-201ENST00000397031 1267 ntBASIC26.91■■□□□ 1.9
CFAP53Q96M91 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CFAP53Q96M91 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.91■■□□□ 1.9
CFAP53Q96M91 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
CFAP53Q96M91 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 AC073314.1-201ENST00000568729 2216 ntBASIC26.9■■□□□ 1.9
CFAP53Q96M91 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 KRT17P3-201ENST00000420566 1262 ntBASIC26.9■■□□□ 1.9
CFAP53Q96M91 POM121L13P-201ENST00000422362 380 ntBASIC26.9■■□□□ 1.9
CFAP53Q96M91 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 AC120498.8-201ENST00000614275 531 ntBASIC26.9■■□□□ 1.9
CFAP53Q96M91 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC26.9■■□□□ 1.9
CFAP53Q96M91 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CFAP53Q96M91 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC26.89■■□□□ 1.9
CFAP53Q96M91 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.89■■□□□ 1.9
CFAP53Q96M91 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CFAP53Q96M91 TMEM191A-211ENST00000637163 1067 ntBASIC26.89■■□□□ 1.9
CFAP53Q96M91 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CFAP53Q96M91 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CFAP53Q96M91 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CFAP53Q96M91 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CFAP53Q96M91 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 FEM1AP1-201ENST00000431297 1995 ntBASIC26.88■■□□□ 1.89
CFAP53Q96M91 AP005212.1-201ENST00000581547 1997 ntBASIC26.88■■□□□ 1.89
CFAP53Q96M91 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 AC128676.1-201ENST00000454392 318 ntBASIC26.88■■□□□ 1.89
CFAP53Q96M91 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CFAP53Q96M91 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC26.88■■□□□ 1.89
CFAP53Q96M91 SMG8-203ENST00000578922 2178 ntBASIC26.87■■□□□ 1.89
CFAP53Q96M91 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC26.87■■□□□ 1.89
CFAP53Q96M91 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CFAP53Q96M91 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CFAP53Q96M91 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms