Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 ECEL1P3-201ENST00000427961 737 ntBASIC20.23■□□□□ 0.83
SIPA1Q96FS4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 MIR4785-201ENST00000585005 73 ntBASIC20.23■□□□□ 0.83
SIPA1Q96FS4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIPA1Q96FS4 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 AC113410.3-201ENST00000623366 203 ntBASIC20.22■□□□□ 0.83
SIPA1Q96FS4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.22■□□□□ 0.83
SIPA1Q96FS4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 AC124283.5-201ENST00000624661 1809 ntBASIC20.21■□□□□ 0.83
SIPA1Q96FS4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 AC211429.1-201ENST00000415277 523 ntBASIC20.21■□□□□ 0.83
SIPA1Q96FS4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 BX088651.1-201ENST00000540551 451 ntBASIC20.21■□□□□ 0.83
SIPA1Q96FS4 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIPA1Q96FS4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
SIPA1Q96FS4 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.2■□□□□ 0.82
SIPA1Q96FS4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SIPA1Q96FS4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SIPA1Q96FS4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms