Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.28■■□□□ 1
TRIM11Q96F44 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.28■■□□□ 1
TRIM11Q96F44 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.28■■□□□ 1
TRIM11Q96F44 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.28■■□□□ 1
TRIM11Q96F44 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.28■■□□□ 1
TRIM11Q96F44 AC007322.1-201ENST00000426983 750 ntBASIC21.28■■□□□ 1
TRIM11Q96F44 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.28■■□□□ 1
TRIM11Q96F44 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.28■■□□□ 1
TRIM11Q96F44 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM11Q96F44 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.28■■□□□ 1
TRIM11Q96F44 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM11Q96F44 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRIM11Q96F44 PCDHAC2-203ENST00000615316 3011 ntBASIC21.27■■□□□ 1
TRIM11Q96F44 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.27■■□□□ 1
TRIM11Q96F44 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TRIM11Q96F44 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRIM11Q96F44 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.27■■□□□ 1
TRIM11Q96F44 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
TRIM11Q96F44 KRT18P68-201ENST00000392293 1000 ntBASIC21.27■■□□□ 1
TRIM11Q96F44 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.27■■□□□ 1
TRIM11Q96F44 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.27■■□□□ 1
TRIM11Q96F44 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.27■■□□□ 1
TRIM11Q96F44 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM11Q96F44 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM11Q96F44 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
TRIM11Q96F44 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM11Q96F44 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM11Q96F44 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM11Q96F44 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM11Q96F44 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM11Q96F44 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM11Q96F44 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
TRIM11Q96F44 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM11Q96F44 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
TRIM11Q96F44 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM11Q96F44 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM11Q96F44 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM11Q96F44 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 CYP2T3P-201ENST00000601990 817 ntBASIC21.25■□□□□ 0.99
TRIM11Q96F44 OR10C1-204ENST00000622521 1039 ntBASIC21.25■□□□□ 0.99
TRIM11Q96F44 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM11Q96F44 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 AFG3L1P-217ENST00000557444 2447 ntBASIC21.24■□□□□ 0.99
TRIM11Q96F44 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 TMEM179-206ENST00000616017 1645 ntBASIC21.24■□□□□ 0.99
TRIM11Q96F44 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM11Q96F44 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM11Q96F44 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM11Q96F44 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM11Q96F44 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRIM11Q96F44 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM11Q96F44 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM11Q96F44 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM11Q96F44 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms