Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.55■□□□□ 0.88
RTP4Q96DX8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 AC105020.6-201ENST00000621523 1217 ntBASIC20.55■□□□□ 0.88
RTP4Q96DX8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RTP4Q96DX8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.55■□□□□ 0.88
RTP4Q96DX8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 CYP2T1P-201ENST00000432607 1285 ntBASIC20.54■□□□□ 0.88
RTP4Q96DX8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 AC104771.1-201ENST00000603335 964 ntBASIC20.54■□□□□ 0.88
RTP4Q96DX8 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.54■□□□□ 0.88
RTP4Q96DX8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RTP4Q96DX8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RTP4Q96DX8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.53■□□□□ 0.88
RTP4Q96DX8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RTP4Q96DX8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.53■□□□□ 0.88
RTP4Q96DX8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RTP4Q96DX8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RTP4Q96DX8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 KRT18P68-201ENST00000392293 1000 ntBASIC20.52■□□□□ 0.88
RTP4Q96DX8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 AC231657.2-201ENST00000624556 255 ntBASIC20.52■□□□□ 0.88
RTP4Q96DX8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.52■□□□□ 0.88
RTP4Q96DX8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RTP4Q96DX8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RTP4Q96DX8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
RTP4Q96DX8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 CYP2T3P-201ENST00000601990 817 ntBASIC20.51■□□□□ 0.87
RTP4Q96DX8 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.51■□□□□ 0.87
RTP4Q96DX8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.51■□□□□ 0.87
RTP4Q96DX8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RTP4Q96DX8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTP4Q96DX8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.5■□□□□ 0.87
RTP4Q96DX8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.5■□□□□ 0.87
RTP4Q96DX8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RTP4Q96DX8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms