Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 AC105036.2-201ENST00000569468 176 ntBASIC19.36■□□□□ 0.69
UBE2E3Q969T4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.36■□□□□ 0.69
UBE2E3Q969T4 MKRN4P-201ENST00000444706 1521 ntBASIC19.35■□□□□ 0.69
UBE2E3Q969T4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 AC006970.2-201ENST00000450065 779 ntBASIC19.35■□□□□ 0.69
UBE2E3Q969T4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 AC073130.3-201ENST00000624389 2278 ntBASIC19.35■□□□□ 0.69
UBE2E3Q969T4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.35■□□□□ 0.69
UBE2E3Q969T4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 AC099778.1-201ENST00000568593 1911 ntBASIC19.34■□□□□ 0.69
UBE2E3Q969T4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
UBE2E3Q969T4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.33■□□□□ 0.69
UBE2E3Q969T4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 CROCCP5-201ENST00000436658 830 ntBASIC19.33■□□□□ 0.68
UBE2E3Q969T4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 C2orf69P4-201ENST00000565394 541 ntBASIC19.33■□□□□ 0.68
UBE2E3Q969T4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 AL050303.2-201ENST00000619798 666 ntBASIC19.33■□□□□ 0.68
UBE2E3Q969T4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
UBE2E3Q969T4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 AL121832.2-201ENST00000610979 668 ntBASIC19.32■□□□□ 0.68
UBE2E3Q969T4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
UBE2E3Q969T4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms