Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
USP7Q93009 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.84■□□□□ 0.77
USP7Q93009 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 AC091799.1-201ENST00000422823 811 ntBASIC19.84■□□□□ 0.77
USP7Q93009 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.84■□□□□ 0.77
USP7Q93009 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
USP7Q93009 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.84■□□□□ 0.77
USP7Q93009 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
USP7Q93009 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP7Q93009 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.83■□□□□ 0.77
USP7Q93009 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.83■□□□□ 0.77
USP7Q93009 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.83■□□□□ 0.77
USP7Q93009 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP7Q93009 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.83■□□□□ 0.77
USP7Q93009 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.83■□□□□ 0.77
USP7Q93009 CDV3P1-201ENST00000471403 739 ntBASIC19.83■□□□□ 0.77
USP7Q93009 AP003097.1-201ENST00000530657 1135 ntBASIC19.83■□□□□ 0.77
USP7Q93009 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.83■□□□□ 0.77
USP7Q93009 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.83■□□□□ 0.77
USP7Q93009 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.83■□□□□ 0.77
USP7Q93009 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.83■□□□□ 0.77
USP7Q93009 FAM21FP-204ENST00000608637 956 ntBASIC19.83■□□□□ 0.77
USP7Q93009 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP7Q93009 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.83■□□□□ 0.76
USP7Q93009 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.83■□□□□ 0.76
USP7Q93009 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
USP7Q93009 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP7Q93009 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.83■□□□□ 0.76
USP7Q93009 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.82■□□□□ 0.76
USP7Q93009 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
USP7Q93009 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.82■□□□□ 0.76
USP7Q93009 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.82■□□□□ 0.76
USP7Q93009 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.82■□□□□ 0.76
USP7Q93009 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.82■□□□□ 0.76
USP7Q93009 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.82■□□□□ 0.76
USP7Q93009 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.82■□□□□ 0.76
USP7Q93009 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 AC073648.6-201ENST00000641589 218 ntBASIC19.82■□□□□ 0.76
USP7Q93009 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.82■□□□□ 0.76
USP7Q93009 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.82■□□□□ 0.76
USP7Q93009 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
USP7Q93009 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP7Q93009 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.81■□□□□ 0.76
USP7Q93009 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP7Q93009 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
USP7Q93009 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP7Q93009 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.81■□□□□ 0.76
USP7Q93009 CYP2T3P-201ENST00000601990 817 ntBASIC19.81■□□□□ 0.76
USP7Q93009 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.81■□□□□ 0.76
USP7Q93009 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP7Q93009 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
USP7Q93009 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
USP7Q93009 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP7Q93009 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.8■□□□□ 0.76
USP7Q93009 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.8■□□□□ 0.76
USP7Q93009 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP7Q93009 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms