Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
TM9SF4Q92544 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.95■□□□□ 0.62
TM9SF4Q92544 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TM9SF4Q92544 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TM9SF4Q92544 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 AL049796.1-201ENST00000565336 1766 ntBASIC18.94■□□□□ 0.62
TM9SF4Q92544 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 AC008403.3-201ENST00000598924 454 ntBASIC18.94■□□□□ 0.62
TM9SF4Q92544 AL359736.2-201ENST00000621992 437 ntBASIC18.94■□□□□ 0.62
TM9SF4Q92544 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 CYP21A1P-202ENST00000354927 1481 ntBASIC18.94■□□□□ 0.62
TM9SF4Q92544 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.94■□□□□ 0.62
TM9SF4Q92544 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TM9SF4Q92544 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF4Q92544 RNF165-205ENST00000588679 2904 ntBASIC18.93■□□□□ 0.62
TM9SF4Q92544 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF4Q92544 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 C1QBPP2-201ENST00000528754 825 ntBASIC18.93■□□□□ 0.62
TM9SF4Q92544 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC105020.6-201ENST00000621523 1217 ntBASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AC116050.2-201ENST00000612102 1779 ntBASIC18.93■□□□□ 0.62
TM9SF4Q92544 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF4Q92544 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF4Q92544 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF4Q92544 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TM9SF4Q92544 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TM9SF4Q92544 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 PGM5P4-201ENST00000421970 445 ntBASIC18.92■□□□□ 0.62
TM9SF4Q92544 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TM9SF4Q92544 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TM9SF4Q92544 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TM9SF4Q92544 AL596275.1-201ENST00000423464 877 ntBASIC18.91■□□□□ 0.62
TM9SF4Q92544 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.91■□□□□ 0.62
TM9SF4Q92544 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms