Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 HTR7P1-201ENST00000538670 1336 ntBASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.64
CASKIN1Q8WXD9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
CASKIN1Q8WXD9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CASKIN1Q8WXD9 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 AC211429.1-201ENST00000415277 523 ntBASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 SAPCD2P4-201ENST00000424595 1171 ntBASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 AL353807.1-201ENST00000427475 662 ntBASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 AL353708.3-201ENST00000610272 989 ntBASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 KRT8P20-201ENST00000423953 1409 ntBASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC31.5■■■□□ 2.63
CASKIN1Q8WXD9 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 AC087499.1-201ENST00000418141 1075 ntBASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 AF106564.1-201ENST00000607058 2553 ntBASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 LINC01023-201ENST00000606054 436 ntBASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 AC026471.5-201ENST00000615068 467 ntBASIC31.49■■■□□ 2.63
CASKIN1Q8WXD9 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
CASKIN1Q8WXD9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 HLA-G-202ENST00000376815 851 ntBASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 HLA-G-203ENST00000376818 1127 ntBASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CASKIN1Q8WXD9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 REXO1L12P-201ENST00000622156 912 ntBASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CASKIN1Q8WXD9 AC005229.4-201ENST00000610085 2198 ntBASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CASKIN1Q8WXD9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC31.45■■■□□ 2.62
CASKIN1Q8WXD9 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CASKIN1Q8WXD9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
CASKIN1Q8WXD9 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC31.44■■■□□ 2.62
CASKIN1Q8WXD9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CASKIN1Q8WXD9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC31.44■■■□□ 2.62
CASKIN1Q8WXD9 CD177P1-201ENST00000606252 935 ntBASIC31.44■■■□□ 2.62
CASKIN1Q8WXD9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 AC097493.4-201ENST00000641197 219 ntBASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC31.43■■■□□ 2.62
CASKIN1Q8WXD9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms