Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SLC44A1Q8WWI5 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SLC44A1Q8WWI5 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 AC097381.1-201ENST00000429019 1296 ntBASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 YBX1P1-201ENST00000445822 960 ntBASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SLC44A1Q8WWI5 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 AL356652.1-201ENST00000615962 565 ntBASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 AP000974.1-201ENST00000623909 2387 ntBASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SLC44A1Q8WWI5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 AC087633.2-202ENST00000565166 1439 ntBASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 PGM5P4-201ENST00000421970 445 ntBASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SLC44A1Q8WWI5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 KRT18P14-201ENST00000534205 1250 ntBASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.11■□□□□ 0.81
SLC44A1Q8WWI5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SLC44A1Q8WWI5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms