Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.36■□□□□ 0.53
CHD6Q8TD26 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 AC079781.3-201ENST00000449110 356 ntBASIC18.35■□□□□ 0.53
CHD6Q8TD26 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD6Q8TD26 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD6Q8TD26 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHD6Q8TD26 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD6Q8TD26 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD6Q8TD26 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.35■□□□□ 0.53
CHD6Q8TD26 AP001160.2-201ENST00000596071 487 ntBASIC18.35■□□□□ 0.53
CHD6Q8TD26 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHD6Q8TD26 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHD6Q8TD26 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD6Q8TD26 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD6Q8TD26 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHD6Q8TD26 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.34■□□□□ 0.53
CHD6Q8TD26 AL512604.3-201ENST00000569583 964 ntBASIC18.34■□□□□ 0.53
CHD6Q8TD26 AC140113.3-201ENST00000605663 199 ntBASIC18.34■□□□□ 0.53
CHD6Q8TD26 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD6Q8TD26 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD6Q8TD26 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.34■□□□□ 0.53
CHD6Q8TD26 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CHD6Q8TD26 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHD6Q8TD26 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHD6Q8TD26 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD6Q8TD26 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CHD6Q8TD26 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHD6Q8TD26 AL590627.1-203ENST00000421194 1026 ntBASIC18.33■□□□□ 0.53
CHD6Q8TD26 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.33■□□□□ 0.53
CHD6Q8TD26 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.33■□□□□ 0.53
CHD6Q8TD26 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHD6Q8TD26 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.33■□□□□ 0.52
CHD6Q8TD26 IL9RP2-201ENST00000423948 1312 ntBASIC18.33■□□□□ 0.52
CHD6Q8TD26 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD6Q8TD26 C11orf96-202ENST00000528572 1834 ntBASIC18.33■□□□□ 0.52
CHD6Q8TD26 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD6Q8TD26 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD6Q8TD26 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD6Q8TD26 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHD6Q8TD26 TSPY12P-201ENST00000421279 868 ntBASIC18.33■□□□□ 0.52
CHD6Q8TD26 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 KRT18P38-201ENST00000449496 1282 ntBASIC18.32■□□□□ 0.52
CHD6Q8TD26 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 AC092338.2-201ENST00000568827 1415 ntBASIC18.32■□□□□ 0.52
CHD6Q8TD26 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHD6Q8TD26 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.32■□□□□ 0.52
CHD6Q8TD26 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 AL023803.3-201ENST00000615559 522 ntBASIC18.32■□□□□ 0.52
CHD6Q8TD26 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CHD6Q8TD26 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 SLC25A1P2-201ENST00000430693 912 ntBASIC18.31■□□□□ 0.52
CHD6Q8TD26 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 AL691403.2-201ENST00000618460 490 ntBASIC18.31■□□□□ 0.52
CHD6Q8TD26 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 AC003102.1-202ENST00000563394 1796 ntBASIC18.31■□□□□ 0.52
CHD6Q8TD26 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.31■□□□□ 0.52
CHD6Q8TD26 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 KRT18P1-202ENST00000452408 1331 ntBASIC18.31■□□□□ 0.52
CHD6Q8TD26 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHD6Q8TD26 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.3■□□□□ 0.52
CHD6Q8TD26 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 AC055717.3-201ENST00000622967 595 ntBASIC18.3■□□□□ 0.52
CHD6Q8TD26 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHD6Q8TD26 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms