Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 RARRES2P2-201ENST00000394842 485 ntBASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 MIR2861-201ENST00000636310 90 ntBASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
DYNC2LI1Q8TCX1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 AC103834.1-201ENST00000520383 144 ntBASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
DYNC2LI1Q8TCX1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 AC092028.1-203ENST00000608262 953 ntBASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.77■□□□□ 0.44
DYNC2LI1Q8TCX1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.77■□□□□ 0.43
DYNC2LI1Q8TCX1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
DYNC2LI1Q8TCX1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.77■□□□□ 0.43
DYNC2LI1Q8TCX1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.77■□□□□ 0.43
DYNC2LI1Q8TCX1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
DYNC2LI1Q8TCX1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.77■□□□□ 0.43
DYNC2LI1Q8TCX1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 MIR3181-201ENST00000578512 73 ntBASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
DYNC2LI1Q8TCX1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 FZD10-202ENST00000539839 3282 ntBASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.75■□□□□ 0.43
DYNC2LI1Q8TCX1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DYNC2LI1Q8TCX1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DYNC2LI1Q8TCX1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DYNC2LI1Q8TCX1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.74■□□□□ 0.43
DYNC2LI1Q8TCX1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DYNC2LI1Q8TCX1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.74■□□□□ 0.43
DYNC2LI1Q8TCX1 MTDHP2-201ENST00000601468 714 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms