Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 AC026471.5-201ENST00000615068 467 ntBASIC17.48■□□□□ 0.39
LINC01560Q8TB33 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01560Q8TB33 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 EP400NL-214ENST00000641289 2402 ntBASIC17.47■□□□□ 0.39
LINC01560Q8TB33 AL355355.2-201ENST00000442321 338 ntBASIC17.47■□□□□ 0.39
LINC01560Q8TB33 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 KRT16P5-201ENST00000455284 522 ntBASIC17.47■□□□□ 0.39
LINC01560Q8TB33 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 AF186192.3-201ENST00000583427 947 ntBASIC17.47■□□□□ 0.39
LINC01560Q8TB33 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 AC010331.1-201ENST00000611423 582 ntBASIC17.47■□□□□ 0.39
LINC01560Q8TB33 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.47■□□□□ 0.39
LINC01560Q8TB33 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 PKD1P6-201ENST00000343738 4769 ntBASIC17.46■□□□□ 0.39
LINC01560Q8TB33 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 AP003071.4-201ENST00000562276 1284 ntBASIC17.46■□□□□ 0.39
LINC01560Q8TB33 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LINC01560Q8TB33 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LINC01560Q8TB33 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LINC01560Q8TB33 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
LINC01560Q8TB33 AL049796.1-201ENST00000565336 1766 ntBASIC17.45■□□□□ 0.38
LINC01560Q8TB33 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 FAM197Y1-201ENST00000421178 764 ntBASIC17.45■□□□□ 0.38
LINC01560Q8TB33 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 CD177P1-201ENST00000606252 935 ntBASIC17.45■□□□□ 0.38
LINC01560Q8TB33 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LINC01560Q8TB33 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
LINC01560Q8TB33 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms