Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 AC233992.3-201ENST00000607491 485 ntBASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 RARRES2P11-201ENST00000635158 484 ntBASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RFWD2Q8NHY2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 AC093503.3-201ENST00000624917 2352 ntBASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 NEFHP1-201ENST00000412845 2629 ntBASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 AL139246.5-201ENST00000606645 996 ntBASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.85■□□□□ 0.77
RFWD2Q8NHY2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 AC099791.1-201ENST00000416440 715 ntBASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RFWD2Q8NHY2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 IGHV3-19-201ENST00000521488 291 ntBASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RFWD2Q8NHY2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD2Q8NHY2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.83■□□□□ 0.76
RFWD2Q8NHY2 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.83■□□□□ 0.76
RFWD2Q8NHY2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD2Q8NHY2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RFWD2Q8NHY2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RFWD2Q8NHY2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFWD2Q8NHY2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms