Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.71■■■□□ 2.67
CFAP43Q8NDM7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CFAP43Q8NDM7 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CFAP43Q8NDM7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CFAP43Q8NDM7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC31.71■■■□□ 2.67
CFAP43Q8NDM7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFAP43Q8NDM7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
CFAP43Q8NDM7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFAP43Q8NDM7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CFAP43Q8NDM7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 KRT16P5-201ENST00000455284 522 ntBASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 AC005363.2-201ENST00000618631 242 ntBASIC31.7■■■□□ 2.66
CFAP43Q8NDM7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 AC073508.3-201ENST00000619697 1419 ntBASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 PTBP1P-201ENST00000554374 1601 ntBASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CFAP43Q8NDM7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP43Q8NDM7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP43Q8NDM7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC31.68■■■□□ 2.66
CFAP43Q8NDM7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP43Q8NDM7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
CFAP43Q8NDM7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CFAP43Q8NDM7 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 AL031963.3-201ENST00000606441 850 ntBASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 SLC25A3P1-201ENST00000443844 931 ntBASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC31.67■■■□□ 2.66
CFAP43Q8NDM7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 UNC93B2-201ENST00000285383 730 ntBASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31.66■■■□□ 2.66
CFAP43Q8NDM7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 DUX4L26-201ENST00000489078 1255 ntBASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 AP000525.1-201ENST00000608286 694 ntBASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CFAP43Q8NDM7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 FAM197Y1-201ENST00000421178 764 ntBASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC31.64■■■□□ 2.66
CFAP43Q8NDM7 HTR7P1-201ENST00000538670 1336 ntBASIC31.64■■■□□ 2.65
CFAP43Q8NDM7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC31.64■■■□□ 2.65
CFAP43Q8NDM7 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC31.64■■■□□ 2.65
CFAP43Q8NDM7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
CFAP43Q8NDM7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms