Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC33Q8N5R6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 AC007322.3-201ENST00000426526 701 ntBASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC33Q8N5R6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 AP005212.1-201ENST00000581547 1997 ntBASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC33Q8N5R6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC33Q8N5R6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 AC100791.3-201ENST00000617619 330 ntBASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC33Q8N5R6 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 MCRIP2P1-201ENST00000394346 511 ntBASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 AL589743.5-201ENST00000616611 1050 ntBASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC33Q8N5R6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 RPS2P4-201ENST00000476944 856 ntBASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 UNC93B4-201ENST00000505679 747 ntBASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC33Q8N5R6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms