Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SYNPOQ8N3V7 AL137060.1-201ENST00000618151 2648 ntBASIC20.52■□□□□ 0.87
SYNPOQ8N3V7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYNPOQ8N3V7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SYNPOQ8N3V7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SYNPOQ8N3V7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 NBPF21P-201ENST00000425093 1451 ntBASIC20.5■□□□□ 0.87
SYNPOQ8N3V7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 AC073195.1-201ENST00000607241 877 ntBASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.49■□□□□ 0.87
SYNPOQ8N3V7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 TMPOP1-202ENST00000424642 1267 ntBASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.48■□□□□ 0.87
SYNPOQ8N3V7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 AC011484.1-201ENST00000377652 1995 ntBASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 AC004264.1-201ENST00000608354 794 ntBASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 AL121906.2-201ENST00000621597 723 ntBASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SYNPOQ8N3V7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms