Protein–RNA interactions for Protein: Q8IWT3

CUL9, Cullin-9, humanhuman

Predictions only

Length 2,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUL9Q8IWT3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CUL9Q8IWT3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 KRT18P1-202ENST00000452408 1331 ntBASIC20.59■□□□□ 0.89
CUL9Q8IWT3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.59■□□□□ 0.89
CUL9Q8IWT3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CUL9Q8IWT3 CCR12P-201ENST00000446203 998 ntBASIC20.59■□□□□ 0.89
CUL9Q8IWT3 AL023973.1-201ENST00000624619 620 ntBASIC20.59■□□□□ 0.89
CUL9Q8IWT3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CUL9Q8IWT3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CUL9Q8IWT3 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.58■□□□□ 0.89
CUL9Q8IWT3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CUL9Q8IWT3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.58■□□□□ 0.89
CUL9Q8IWT3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.58■□□□□ 0.89
CUL9Q8IWT3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.58■□□□□ 0.89
CUL9Q8IWT3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 AL121749.1-202ENST00000609313 2153 ntBASIC20.58■□□□□ 0.88
CUL9Q8IWT3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.58■□□□□ 0.88
CUL9Q8IWT3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 HLA-G-203ENST00000376818 1127 ntBASIC20.57■□□□□ 0.88
CUL9Q8IWT3 TSPY19P-201ENST00000418461 509 ntBASIC20.57■□□□□ 0.88
CUL9Q8IWT3 TSPY18P-201ENST00000441642 509 ntBASIC20.57■□□□□ 0.88
CUL9Q8IWT3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 AL512604.3-201ENST00000569583 964 ntBASIC20.57■□□□□ 0.88
CUL9Q8IWT3 AC116562.4-202ENST00000641738 218 ntBASIC20.57■□□□□ 0.88
CUL9Q8IWT3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 AC092329.2-201ENST00000598402 547 ntBASIC20.57■□□□□ 0.88
CUL9Q8IWT3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CUL9Q8IWT3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 KRT18P38-201ENST00000449496 1282 ntBASIC20.56■□□□□ 0.88
CUL9Q8IWT3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 AC092338.2-201ENST00000568827 1415 ntBASIC20.56■□□□□ 0.88
CUL9Q8IWT3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 KRT16P4-201ENST00000453883 522 ntBASIC20.56■□□□□ 0.88
CUL9Q8IWT3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CUL9Q8IWT3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 AC079089.2-201ENST00000531211 1277 ntBASIC20.55■□□□□ 0.88
CUL9Q8IWT3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 TERC-201ENST00000602385 541 ntBASIC20.55■□□□□ 0.88
CUL9Q8IWT3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.55■□□□□ 0.88
CUL9Q8IWT3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.54■□□□□ 0.88
CUL9Q8IWT3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 KRT18P31-201ENST00000506277 1292 ntBASIC20.54■□□□□ 0.88
CUL9Q8IWT3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.54■□□□□ 0.88
CUL9Q8IWT3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms