Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.94■□□□□ 0.78
NUDCD3Q8IVD9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 BX119927.1-201ENST00000636596 1552 ntBASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 MIR939-201ENST00000401314 82 ntBASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 AF213884.3-201ENST00000563833 479 ntBASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.93■□□□□ 0.78
NUDCD3Q8IVD9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 AC091305.1-201ENST00000479476 895 ntBASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NUDCD3Q8IVD9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 AC010141.2-201ENST00000452426 721 ntBASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 TNXA-203ENST00000507684 2038 ntBASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 AC093484.2-201ENST00000580996 2166 ntBASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.91■□□□□ 0.78
NUDCD3Q8IVD9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NUDCD3Q8IVD9 SLC7A5P2-201ENST00000553010 536 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms