Protein–RNA interactions for Protein: Q7LBC6

KDM3B, Lysine-specific demethylase 3B, humanhuman

Predictions only

Length 1,761 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3BQ7LBC6 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM3BQ7LBC6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
KDM3BQ7LBC6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC25.88■■□□□ 1.73
KDM3BQ7LBC6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.88■■□□□ 1.73
KDM3BQ7LBC6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM3BQ7LBC6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
KDM3BQ7LBC6 RPS2P55-201ENST00000397318 883 ntBASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 AC107956.1-201ENST00000494359 873 ntBASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 AC233702.5-201ENST00000584107 538 ntBASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 Z99916.2-201ENST00000604037 246 ntBASIC25.87■■□□□ 1.73
KDM3BQ7LBC6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 MIR718-201ENST00000390190 70 ntBASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
KDM3BQ7LBC6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 SNORA78-201ENST00000459373 127 ntBASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 RARRES2P10-201ENST00000564312 460 ntBASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.85■■□□□ 1.73
KDM3BQ7LBC6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 AL049637.2-201ENST00000641778 930 ntBASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC25.84■■□□□ 1.73
KDM3BQ7LBC6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 AC113410.3-201ENST00000623366 203 ntBASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.83■■□□□ 1.73
KDM3BQ7LBC6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
KDM3BQ7LBC6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 AL355075.4-201ENST00000554988 638 ntBASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
KDM3BQ7LBC6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM3BQ7LBC6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.81■■□□□ 1.72
KDM3BQ7LBC6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM3BQ7LBC6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM3BQ7LBC6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms