Protein–RNA interactions for Protein: Q6PIY5

C1orf228, Uncharacterized protein C1orf228, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228Q6PIY5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
C1orf228Q6PIY5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.3■■□□□ 1
C1orf228Q6PIY5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.3■■□□□ 1
C1orf228Q6PIY5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.3■■□□□ 1
C1orf228Q6PIY5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.3■■□□□ 1
C1orf228Q6PIY5 AL359736.2-201ENST00000621992 437 ntBASIC21.3■■□□□ 1
C1orf228Q6PIY5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
C1orf228Q6PIY5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C1orf228Q6PIY5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C1orf228Q6PIY5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.3■■□□□ 1
C1orf228Q6PIY5 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.29■■□□□ 1
C1orf228Q6PIY5 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.29■■□□□ 1
C1orf228Q6PIY5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.29■■□□□ 1
C1orf228Q6PIY5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.29■■□□□ 1
C1orf228Q6PIY5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
C1orf228Q6PIY5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 AC008403.3-201ENST00000598924 454 ntBASIC21.28■■□□□ 1
C1orf228Q6PIY5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
C1orf228Q6PIY5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
C1orf228Q6PIY5 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C1orf228Q6PIY5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C1orf228Q6PIY5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.27■■□□□ 1
C1orf228Q6PIY5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
C1orf228Q6PIY5 AL355472.2-201ENST00000422958 438 ntBASIC21.27■■□□□ 1
C1orf228Q6PIY5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 PNMA6B-201ENST00000538162 1200 ntBASIC21.27■■□□□ 1
C1orf228Q6PIY5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
C1orf228Q6PIY5 AC027702.1-201ENST00000563810 1770 ntBASIC21.27■■□□□ 1
C1orf228Q6PIY5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
C1orf228Q6PIY5 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
C1orf228Q6PIY5 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
C1orf228Q6PIY5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 KRT18P68-201ENST00000392293 1000 ntBASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 FAM197Y4-202ENST00000622692 608 ntBASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.26■□□□□ 0.99
C1orf228Q6PIY5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C1orf228Q6PIY5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C1orf228Q6PIY5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C1orf228Q6PIY5 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C1orf228Q6PIY5 AP005212.1-201ENST00000581547 1997 ntBASIC21.25■□□□□ 0.99
C1orf228Q6PIY5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C1orf228Q6PIY5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms