Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.15■□□□□ 0.5
RTL6Q6ICC9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTL6Q6ICC9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RTL6Q6ICC9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.14■□□□□ 0.5
RTL6Q6ICC9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RTL6Q6ICC9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 AC011484.1-201ENST00000377652 1995 ntBASIC18.13■□□□□ 0.49
RTL6Q6ICC9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 AC005829.2-201ENST00000571422 1056 ntBASIC18.13■□□□□ 0.49
RTL6Q6ICC9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 AC006557.6-201ENST00000623071 864 ntBASIC18.13■□□□□ 0.49
RTL6Q6ICC9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTL6Q6ICC9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 AC120498.8-201ENST00000614275 531 ntBASIC18.12■□□□□ 0.49
RTL6Q6ICC9 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTL6Q6ICC9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 Z99916.2-201ENST00000604037 246 ntBASIC18.11■□□□□ 0.49
RTL6Q6ICC9 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTL6Q6ICC9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms