Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 AC125437.2-201ENST00000625180 2167 ntBASIC20.25■□□□□ 0.83
LGSNQ5TDP6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.25■□□□□ 0.83
LGSNQ5TDP6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 AC018445.3-201ENST00000624177 1945 ntBASIC20.24■□□□□ 0.83
LGSNQ5TDP6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 AC243732.1-201ENST00000612648 864 ntBASIC20.24■□□□□ 0.83
LGSNQ5TDP6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LGSNQ5TDP6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 AC105265.2-201ENST00000467189 838 ntBASIC20.23■□□□□ 0.83
LGSNQ5TDP6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 AC104187.1-201ENST00000607510 612 ntBASIC20.23■□□□□ 0.83
LGSNQ5TDP6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LGSNQ5TDP6 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 LINC02228-203ENST00000641970 1355 ntBASIC20.22■□□□□ 0.83
LGSNQ5TDP6 AL158211.5-201ENST00000623583 2518 ntBASIC20.22■□□□□ 0.83
LGSNQ5TDP6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 AC087289.5-201ENST00000586076 3175 ntBASIC20.22■□□□□ 0.83
LGSNQ5TDP6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LGSNQ5TDP6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 AC027612.3-201ENST00000413684 1047 ntBASIC20.21■□□□□ 0.83
LGSNQ5TDP6 AC091799.1-201ENST00000422823 811 ntBASIC20.21■□□□□ 0.83
LGSNQ5TDP6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 BX119927.1-201ENST00000636596 1552 ntBASIC20.21■□□□□ 0.83
LGSNQ5TDP6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
LGSNQ5TDP6 AL691432.2-201ENST00000607222 2038 ntBASIC20.2■□□□□ 0.83
LGSNQ5TDP6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.2■□□□□ 0.82
LGSNQ5TDP6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LGSNQ5TDP6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms