Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RUNDC3AQ59EK9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 TREX1-205ENST00000625293 1783 ntBASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RUNDC3AQ59EK9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 CDV3P1-201ENST00000471403 739 ntBASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 AC004854.2-201ENST00000608450 1441 ntBASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.97■□□□□ 0.63
RUNDC3AQ59EK9 AC005332.7-201ENST00000614046 2005 ntBASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 AC098818.2-201ENST00000564925 2320 ntBASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.96■□□□□ 0.63
RUNDC3AQ59EK9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RUNDC3AQ59EK9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms