Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPN20Q4JDL3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 BX119927.1-201ENST00000636596 1552 ntBASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 AC091874.3-201ENST00000512672 1195 ntBASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
PTPN20Q4JDL3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 HLA-L-209ENST00000420110 1011 ntBASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 TCF3P1-201ENST00000423021 1937 ntBASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PTPN20Q4JDL3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 MIR4758-201ENST00000577688 71 ntBASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 MYC-209ENST00000641252 345 ntBASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PTPN20Q4JDL3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 AC142086.2-201ENST00000569753 217 ntBASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PTPN20Q4JDL3 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms