Protein–RNA interactions for Protein: Q15428

SF3A2, Splicing factor 3A subunit 2, humanhuman

Known RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2Q15428 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SF3A2Q15428 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.96■□□□□ 0.79
SF3A2Q15428 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.96■□□□□ 0.79
SF3A2Q15428 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.96■□□□□ 0.79
SF3A2Q15428 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.96■□□□□ 0.79
SF3A2Q15428 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.96■□□□□ 0.79
SF3A2Q15428 AL356652.1-201ENST00000615962 565 ntBASIC19.96■□□□□ 0.79
SF3A2Q15428 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SF3A2Q15428 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SF3A2Q15428 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.95■□□□□ 0.78
SF3A2Q15428 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.95■□□□□ 0.78
SF3A2Q15428 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 SLC25A3P1-201ENST00000443844 931 ntBASIC19.95■□□□□ 0.78
SF3A2Q15428 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.95■□□□□ 0.78
SF3A2Q15428 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 AL121829.2-201ENST00000620908 328 ntBASIC19.95■□□□□ 0.78
SF3A2Q15428 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.95■□□□□ 0.78
SF3A2Q15428 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.95■□□□□ 0.78
SF3A2Q15428 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.95■□□□□ 0.78
SF3A2Q15428 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.95■□□□□ 0.78
SF3A2Q15428 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SF3A2Q15428 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.94■□□□□ 0.78
SF3A2Q15428 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SF3A2Q15428 PKD1P6-201ENST00000343738 4769 ntBASIC19.94■□□□□ 0.78
SF3A2Q15428 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SF3A2Q15428 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SF3A2Q15428 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SF3A2Q15428 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.94■□□□□ 0.78
SF3A2Q15428 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.94■□□□□ 0.78
SF3A2Q15428 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.94■□□□□ 0.78
SF3A2Q15428 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.94■□□□□ 0.78
SF3A2Q15428 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.94■□□□□ 0.78
SF3A2Q15428 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.94■□□□□ 0.78
SF3A2Q15428 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.94■□□□□ 0.78
SF3A2Q15428 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SF3A2Q15428 AC010947.1-201ENST00000623454 693 ntBASIC19.94■□□□□ 0.78
SF3A2Q15428 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SF3A2Q15428 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SF3A2Q15428 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.94■□□□□ 0.78
SF3A2Q15428 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.94■□□□□ 0.78
SF3A2Q15428 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SF3A2Q15428 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SF3A2Q15428 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.93■□□□□ 0.78
SF3A2Q15428 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.93■□□□□ 0.78
SF3A2Q15428 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.93■□□□□ 0.78
SF3A2Q15428 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.93■□□□□ 0.78
SF3A2Q15428 WWOX-216ENST00000569818 525 ntBASIC19.93■□□□□ 0.78
SF3A2Q15428 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.93■□□□□ 0.78
SF3A2Q15428 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.93■□□□□ 0.78
SF3A2Q15428 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.93■□□□□ 0.78
SF3A2Q15428 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.93■□□□□ 0.78
SF3A2Q15428 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.93■□□□□ 0.78
SF3A2Q15428 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SF3A2Q15428 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SF3A2Q15428 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.92■□□□□ 0.78
SF3A2Q15428 AC124283.5-201ENST00000624661 1809 ntBASIC19.92■□□□□ 0.78
SF3A2Q15428 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.92■□□□□ 0.78
SF3A2Q15428 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.92■□□□□ 0.78
SF3A2Q15428 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SF3A2Q15428 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.92■□□□□ 0.78
SF3A2Q15428 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.92■□□□□ 0.78
SF3A2Q15428 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.92■□□□□ 0.78
SF3A2Q15428 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SF3A2Q15428 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SF3A2Q15428 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SF3A2Q15428 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SF3A2Q15428 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SF3A2Q15428 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms