Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 INP2YMR163C 2118 nt1.74□□□□□ -2.13
PDH1Q12428 RPB10YOR210W 213 nt1.74□□□□□ -2.13
PDH1Q12428 MVP1YMR004W 1536 nt1.74□□□□□ -2.13
PDH1Q12428 RPL31AYDL075W 342 nt1.73□□□□□ -2.13
PDH1Q12428 YGR265WYGR265W 411 nt1.73□□□□□ -2.13
PDH1Q12428 tT(UGU)HtT(UGU)H 72 nt1.73□□□□□ -2.13
PDH1Q12428 COA6YMR244C-A 315 nt1.73□□□□□ -2.13
PDH1Q12428 HSL1YKL101W 4557 nt1.73□□□□□ -2.13
PDH1Q12428 YIL032CYIL032C 357 nt1.72□□□□□ -2.13
PDH1Q12428 ZIP1YDR285W 2628 nt1.72□□□□□ -2.13
PDH1Q12428 RLM1YPL089C 2031 nt1.71□□□□□ -2.14
PDH1Q12428 YDR003W-AYDR003W-A 123 nt1.71□□□□□ -2.14
PDH1Q12428 YDR366CYDR366C 399 nt1.71□□□□□ -2.14
PDH1Q12428 YHL042WYHL042W 453 nt1.71□□□□□ -2.14
PDH1Q12428 YHR063W-AYHR063W-A 336 nt1.71□□□□□ -2.14
PDH1Q12428 YPL152W-AYPL152W-A 99 nt1.71□□□□□ -2.14
PDH1Q12428 YPR063CYPR063C 423 nt1.71□□□□□ -2.14
PDH1Q12428 MAK10YEL053C 2202 nt1.71□□□□□ -2.14
PDH1Q12428 SKI3YPR189W 4299 nt1.7□□□□□ -2.14
PDH1Q12428 BPH1YCR032W 6504 nt1.7□□□□□ -2.14
PDH1Q12428 HMRA2YCR096C 360 nt1.7□□□□□ -2.14
PDH1Q12428 snR72snR72 98 nt1.7□□□□□ -2.14
PDH1Q12428 snR8snR8 190 nt1.7□□□□□ -2.14
PDH1Q12428 YJL135WYJL135W 318 nt1.7□□□□□ -2.14
PDH1Q12428 YMR230W-AYMR230W-A 189 nt1.7□□□□□ -2.14
PDH1Q12428 YOR019WYOR019W 2193 nt1.7□□□□□ -2.14
PDH1Q12428 FRK1YPL141C 2598 nt1.7□□□□□ -2.14
PDH1Q12428 LRE1YCL051W 1752 nt1.7□□□□□ -2.14
PDH1Q12428 YLL032CYLL032C 2478 nt1.69□□□□□ -2.14
PDH1Q12428 YDR344CYDR344C 444 nt1.69□□□□□ -2.14
PDH1Q12428 YGR069WYGR069W 336 nt1.69□□□□□ -2.14
PDH1Q12428 CHS1YNL192W 3396 nt1.69□□□□□ -2.14
PDH1Q12428 KCS1YDR017C 3153 nt1.68□□□□□ -2.14
PDH1Q12428 CDC31YOR257W 486 nt1.68□□□□□ -2.14
PDH1Q12428 SPO24YPR036W-A 204 nt1.68□□□□□ -2.14
PDH1Q12428 ALG13YGL047W 609 nt1.67□□□□□ -2.14
PDH1Q12428 YJL015CYJL015C 285 nt1.67□□□□□ -2.14
PDH1Q12428 HUG1YML058W-A 207 nt1.67□□□□□ -2.14
PDH1Q12428 YLR035C-AYLR035C-A 3468 nt1.67□□□□□ -2.14
PDH1Q12428 RAD61YDR014W 1944 nt1.67□□□□□ -2.14
PDH1Q12428 HMI1YOL095C 2121 nt1.67□□□□□ -2.14
PDH1Q12428 MSH5YDL154W 2706 nt1.67□□□□□ -2.14
PDH1Q12428 snR60snR60 104 nt1.66□□□□□ -2.14
PDH1Q12428 STF2YGR008C 255 nt1.66□□□□□ -2.14
PDH1Q12428 YMR158W-BYMR158W-B 321 nt1.66□□□□□ -2.14
PDH1Q12428 YMR247W-AYMR247W-A 144 nt1.66□□□□□ -2.14
PDH1Q12428 SAS3YBL052C 2496 nt1.66□□□□□ -2.14
PDH1Q12428 RTP1YMR185W 2946 nt1.65□□□□□ -2.14
PDH1Q12428 YDL211CYDL211C 1119 nt1.65□□□□□ -2.15
PDH1Q12428 COG8YML071C 1824 nt1.65□□□□□ -2.15
PDH1Q12428 UTP21YLR409C 2820 nt1.65□□□□□ -2.15
PDH1Q12428 VPS15YBR097W 4365 nt1.65□□□□□ -2.15
PDH1Q12428 OST1YJL002C 1431 nt1.65□□□□□ -2.15
PDH1Q12428 PMD1YER132C 5262 nt1.65□□□□□ -2.15
PDH1Q12428 CAT8YMR280C 4302 nt1.64□□□□□ -2.15
PDH1Q12428 SRP14YDL092W 441 nt1.64□□□□□ -2.15
PDH1Q12428 YOR008C-AYOR008C-A 225 nt1.64□□□□□ -2.15
PDH1Q12428 SCW11YGL028C 1629 nt1.64□□□□□ -2.15
PDH1Q12428 MLH3YPL164C 2148 nt1.64□□□□□ -2.15
PDH1Q12428 PIP2YOR363C 2991 nt1.64□□□□□ -2.15
PDH1Q12428 FIG2YCR089W 4830 nt1.63□□□□□ -2.15
PDH1Q12428 SDH2YLL041C 801 nt1.63□□□□□ -2.15
PDH1Q12428 LCD1YDR499W 2244 nt1.62□□□□□ -2.15
PDH1Q12428 BRR2YER172C 6492 nt1.62□□□□□ -2.15
PDH1Q12428 MON2YNL297C 4911 nt1.62□□□□□ -2.15
PDH1Q12428 MSH3YCR092C 3057 nt1.62□□□□□ -2.15
PDH1Q12428 ENV11YGR071C 2583 nt1.61□□□□□ -2.15
PDH1Q12428 SSS1YDR086C 243 nt1.61□□□□□ -2.15
PDH1Q12428 YEL020C-BYEL020C-B 198 nt1.61□□□□□ -2.15
PDH1Q12428 YMR242W-AYMR242W-A 90 nt1.61□□□□□ -2.15
PDH1Q12428 YOL160WYOL160W 342 nt1.61□□□□□ -2.15
PDH1Q12428 SPT21YMR179W 2277 nt1.61□□□□□ -2.15
PDH1Q12428 ZIP2YGL249W 2115 nt1.61□□□□□ -2.15
PDH1Q12428 BST1YFL025C 3090 nt1.6□□□□□ -2.15
PDH1Q12428 DGR2YKL121W 2559 nt1.6□□□□□ -2.15
PDH1Q12428 PIG1YLR273C 1947 nt1.6□□□□□ -2.15
PDH1Q12428 YLR422WYLR422W 5799 nt1.6□□□□□ -2.15
PDH1Q12428 NIP100YPL174C 2607 nt1.6□□□□□ -2.15
PDH1Q12428 SPC98YNL126W 2541 nt1.6□□□□□ -2.15
PDH1Q12428 APL2YKL135C 2181 nt1.6□□□□□ -2.15
PDH1Q12428 YOR108C-AYOR108C-A 210 nt1.6□□□□□ -2.15
PDH1Q12428 YLR419WYLR419W 4308 nt1.59□□□□□ -2.16
PDH1Q12428 SXM1YDR395W 2835 nt1.58□□□□□ -2.16
PDH1Q12428 VIK1YPL253C 1944 nt1.58□□□□□ -2.16
PDH1Q12428 YDR182W-AYDR182W-A 204 nt1.58□□□□□ -2.16
PDH1Q12428 YGL188C-AYGL188C-A 141 nt1.58□□□□□ -2.16
PDH1Q12428 snR49snR49 165 nt1.58□□□□□ -2.16
PDH1Q12428 MPT5YGL178W 2580 nt1.58□□□□□ -2.16
PDH1Q12428 NCA2YPR155C 1851 nt1.58□□□□□ -2.16
PDH1Q12428 MAD1YGL086W 2250 nt1.57□□□□□ -2.16
PDH1Q12428 YNL028WYNL028W 318 nt1.57□□□□□ -2.16
PDH1Q12428 YGR130CYGR130C 2451 nt1.57□□□□□ -2.16
PDH1Q12428 RAD34YDR314C 2079 nt1.56□□□□□ -2.16
PDH1Q12428 PAU2YEL049W 363 nt1.56□□□□□ -2.16
PDH1Q12428 EMC5YIL027C 426 nt1.56□□□□□ -2.16
PDH1Q12428 YJL022WYJL022W 309 nt1.56□□□□□ -2.16
PDH1Q12428 CSE2YNR010W 450 nt1.56□□□□□ -2.16
PDH1Q12428 AI5_ALPHAQ0070 1893 nt1.56□□□□□ -2.16
PDH1Q12428 MEC1YBR136W 7107 nt1.56□□□□□ -2.16
PDH1Q12428 YCK3YER123W 1575 nt1.55□□□□□ -2.16
Retrieved 100 of 7,029 protein–RNA pairs in 88 ms