Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 RPB10YOR210W 213 nt1.36□□□□□ -2.19
RUP1Q12242 snR51snR51 107 nt1.36□□□□□ -2.19
RUP1Q12242 NUP188YML103C 4968 nt1.36□□□□□ -2.19
RUP1Q12242 CDC25YLR310C 4770 nt1.35□□□□□ -2.19
RUP1Q12242 SPC98YNL126W 2541 nt1.35□□□□□ -2.19
RUP1Q12242 SGO1YOR073W 1773 nt1.35□□□□□ -2.19
RUP1Q12242 IRC23YOR044W 474 nt1.35□□□□□ -2.19
RUP1Q12242 PBY1YBR094W 2262 nt1.35□□□□□ -2.19
RUP1Q12242 MAD1YGL086W 2250 nt1.34□□□□□ -2.2
RUP1Q12242 YNL284C-BYNL284C-B 5268 nt1.34□□□□□ -2.2
RUP1Q12242 APL2YKL135C 2181 nt1.34□□□□□ -2.2
RUP1Q12242 SLY1YDR189W 2001 nt1.33□□□□□ -2.2
RUP1Q12242 YOR072W-AYOR072W-A 249 nt1.33□□□□□ -2.2
RUP1Q12242 SAS3YBL052C 2496 nt1.33□□□□□ -2.2
RUP1Q12242 MUK1YPL070W 1839 nt1.33□□□□□ -2.2
RUP1Q12242 YOR199WYOR199W 330 nt1.32□□□□□ -2.2
RUP1Q12242 SEC21YNL287W 2808 nt1.32□□□□□ -2.2
RUP1Q12242 EST2YLR318W 2655 nt1.32□□□□□ -2.2
RUP1Q12242 NOC3YLR002C 1992 nt1.31□□□□□ -2.2
RUP1Q12242 SCW11YGL028C 1629 nt1.31□□□□□ -2.2
RUP1Q12242 YDL211CYDL211C 1119 nt1.31□□□□□ -2.2
RUP1Q12242 CSN9YDR179C 489 nt1.31□□□□□ -2.2
RUP1Q12242 YIL020C-AYIL020C-A 339 nt1.31□□□□□ -2.2
RUP1Q12242 YJL015CYJL015C 285 nt1.31□□□□□ -2.2
RUP1Q12242 YMR242W-AYMR242W-A 90 nt1.31□□□□□ -2.2
RUP1Q12242 VPS54YDR027C 2670 nt1.31□□□□□ -2.2
RUP1Q12242 RPS20YHL015W 366 nt1.3□□□□□ -2.2
RUP1Q12242 tW(UCA)QtW(UCA)Q 74 nt1.3□□□□□ -2.2
RUP1Q12242 YNL058CYNL058C 951 nt1.3□□□□□ -2.2
RUP1Q12242 NUT1YGL151W 3399 nt1.29□□□□□ -2.2
RUP1Q12242 ZIP2YGL249W 2115 nt1.29□□□□□ -2.2
RUP1Q12242 YPR170W-AYPR170W-A 186 nt1.29□□□□□ -2.2
RUP1Q12242 AZF1YOR113W 2745 nt1.28□□□□□ -2.2
RUP1Q12242 NPC2YDL046W 522 nt1.28□□□□□ -2.2
RUP1Q12242 CDC36YDL165W 576 nt1.28□□□□□ -2.2
RUP1Q12242 YAR053WYAR053W 297 nt1.28□□□□□ -2.2
RUP1Q12242 YLR334CYLR334C 381 nt1.28□□□□□ -2.2
RUP1Q12242 YSY6YBR162W-A 198 nt1.28□□□□□ -2.2
RUP1Q12242 INP2YMR163C 2118 nt1.27□□□□□ -2.21
RUP1Q12242 YJR003CYJR003C 1560 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)E1tH(GUG)E1 72 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)E2tH(GUG)E2 72 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)G1tH(GUG)G1 72 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)G2tH(GUG)G2 72 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)HtH(GUG)H 72 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)KtH(GUG)K 72 nt1.27□□□□□ -2.21
RUP1Q12242 tH(GUG)MtH(GUG)M 72 nt1.27□□□□□ -2.21
RUP1Q12242 MSH3YCR092C 3057 nt1.27□□□□□ -2.21
RUP1Q12242 RPL33BYOR234C 324 nt1.26□□□□□ -2.21
RUP1Q12242 YPR012WYPR012W 255 nt1.26□□□□□ -2.21
RUP1Q12242 SLD3YGL113W 2007 nt1.26□□□□□ -2.21
RUP1Q12242 YBL008W-AYBL008W-A 240 nt1.25□□□□□ -2.21
RUP1Q12242 YOL160WYOL160W 342 nt1.25□□□□□ -2.21
RUP1Q12242 CDC39YCR093W 6327 nt1.25□□□□□ -2.21
RUP1Q12242 LAA1YJL207C 6045 nt1.24□□□□□ -2.21
RUP1Q12242 SPT21YMR179W 2277 nt1.24□□□□□ -2.21
RUP1Q12242 YLL054CYLL054C 2532 nt1.24□□□□□ -2.21
RUP1Q12242 YGR035CYGR035C 351 nt1.24□□□□□ -2.21
RUP1Q12242 YML007C-AYML007C-A 111 nt1.24□□□□□ -2.21
RUP1Q12242 YPL261CYPL261C 309 nt1.24□□□□□ -2.21
RUP1Q12242 YPR002C-AYPR002C-A 198 nt1.24□□□□□ -2.21
RUP1Q12242 YDR426CYDR426C 378 nt1.23□□□□□ -2.21
RUP1Q12242 MPT5YGL178W 2580 nt1.23□□□□□ -2.21
RUP1Q12242 LCD1YDR499W 2244 nt1.23□□□□□ -2.21
RUP1Q12242 PIP2YOR363C 2991 nt1.23□□□□□ -2.21
RUP1Q12242 RSM22YKL155C 1887 nt1.22□□□□□ -2.21
RUP1Q12242 CLU1YMR012W 3834 nt1.22□□□□□ -2.21
RUP1Q12242 RAD9YDR217C 3930 nt1.22□□□□□ -2.21
RUP1Q12242 YLL020CYLL020C 306 nt1.22□□□□□ -2.21
RUP1Q12242 RRT15YLR162W-A 189 nt1.22□□□□□ -2.21
RUP1Q12242 RPL38YLR325C 237 nt1.22□□□□□ -2.21
RUP1Q12242 YPR016W-AYPR016W-A 261 nt1.22□□□□□ -2.21
RUP1Q12242 COG4YPR105C 2586 nt1.22□□□□□ -2.21
RUP1Q12242 APL3YBL037W 3078 nt1.21□□□□□ -2.21
RUP1Q12242 YPR063CYPR063C 423 nt1.21□□□□□ -2.22
RUP1Q12242 MSN5YDR335W 3675 nt1.21□□□□□ -2.22
RUP1Q12242 SWI4YER111C 3282 nt1.21□□□□□ -2.22
RUP1Q12242 RAD34YDR314C 2079 nt1.2□□□□□ -2.22
RUP1Q12242 SLI15YBR156C 2097 nt1.2□□□□□ -2.22
RUP1Q12242 YOR108C-AYOR108C-A 210 nt1.2□□□□□ -2.22
RUP1Q12242 YBR012CYBR012C 420 nt1.2□□□□□ -2.22
RUP1Q12242 YBR221W-AYBR221W-A 105 nt1.2□□□□□ -2.22
RUP1Q12242 FIG4YNL325C 2640 nt1.2□□□□□ -2.22
RUP1Q12242 SET3YKR029C 2256 nt1.19□□□□□ -2.22
RUP1Q12242 RPL35AYDL191W 363 nt1.19□□□□□ -2.22
RUP1Q12242 NIP100YPL174C 2607 nt1.18□□□□□ -2.22
RUP1Q12242 HMRA1YCR097W 381 nt1.18□□□□□ -2.22
RUP1Q12242 MAM33YIL070C 801 nt1.18□□□□□ -2.22
RUP1Q12242 BIL1YOR304C-A 231 nt1.18□□□□□ -2.22
RUP1Q12242 STO1YMR125W 2586 nt1.18□□□□□ -2.22
RUP1Q12242 EAF1YDR359C 2949 nt1.18□□□□□ -2.22
RUP1Q12242 RIM20YOR275C 1986 nt1.17□□□□□ -2.22
RUP1Q12242 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
RUP1Q12242 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
RUP1Q12242 STB6YKL072W 2301 nt1.17□□□□□ -2.22
RUP1Q12242 YJR011CYJR011C 786 nt1.17□□□□□ -2.22
RUP1Q12242 PCC1YKR095W-A 267 nt1.17□□□□□ -2.22
RUP1Q12242 YOR161W-BYOR161W-B 261 nt1.17□□□□□ -2.22
RUP1Q12242 SEC3YER008C 4011 nt1.17□□□□□ -2.22
RUP1Q12242 YMR290W-AYMR290W-A 348 nt1.16□□□□□ -2.22
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms