Protein–RNA interactions for Protein: Q03957

CTK1, CTD kinase subunit alpha, yeastyeast

Known RBP Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CTK1Q03957 YBL012CYBL012C 402 nt2.18□□□□□ -2.06
CTK1Q03957 KRE33YNL132W 3171 nt2.17□□□□□ -2.06
CTK1Q03957 SRP14YDL092W 441 nt2.17□□□□□ -2.06
CTK1Q03957 HSH155YMR288W 2916 nt2.17□□□□□ -2.06
CTK1Q03957 YGL217CYGL217C 342 nt2.16□□□□□ -2.06
CTK1Q03957 YOR218CYOR218C 420 nt2.16□□□□□ -2.06
CTK1Q03957 PUT3YKL015W 2940 nt2.16□□□□□ -2.06
CTK1Q03957 NOP14YDL148C 2433 nt2.16□□□□□ -2.06
CTK1Q03957 TUS1YLR425W 3924 nt2.15□□□□□ -2.06
CTK1Q03957 SSD1YDR293C 3753 nt2.15□□□□□ -2.07
CTK1Q03957 ATP7YKL016C 525 nt2.15□□□□□ -2.07
CTK1Q03957 YBR131C-AYBR131C-A 90 nt2.15□□□□□ -2.07
CTK1Q03957 snR46snR46 197 nt2.15□□□□□ -2.07
CTK1Q03957 ENV11YGR071C 2583 nt2.15□□□□□ -2.07
CTK1Q03957 SAP190YKR028W 3102 nt2.15□□□□□ -2.07
CTK1Q03957 SPO21YOL091W 1830 nt2.14□□□□□ -2.07
CTK1Q03957 RAV1YJR033C 4074 nt2.14□□□□□ -2.07
CTK1Q03957 MRP10YDL045W-A 288 nt2.14□□□□□ -2.07
CTK1Q03957 NAM7YMR080C 2916 nt2.14□□□□□ -2.07
CTK1Q03957 CAT2YML042W 2013 nt2.13□□□□□ -2.07
CTK1Q03957 MSC6YOR354C 2079 nt2.13□□□□□ -2.07
CTK1Q03957 RPL34BYIL052C 366 nt2.13□□□□□ -2.07
CTK1Q03957 YJL120WYJL120W 324 nt2.13□□□□□ -2.07
CTK1Q03957 GIP3YPL137C 3831 nt2.13□□□□□ -2.07
CTK1Q03957 SEC16YPL085W 6588 nt2.13□□□□□ -2.07
CTK1Q03957 TFC3YAL001C 3483 nt2.12□□□□□ -2.07
CTK1Q03957 RLM1YPL089C 2031 nt2.12□□□□□ -2.07
CTK1Q03957 IRA2YOL081W 9240 nt2.12□□□□□ -2.07
CTK1Q03957 YCR102W-AYCR102W-A 198 nt2.12□□□□□ -2.07
CTK1Q03957 YDR182W-AYDR182W-A 204 nt2.12□□□□□ -2.07
CTK1Q03957 YMR242W-AYMR242W-A 90 nt2.12□□□□□ -2.07
CTK1Q03957 YOR170WYOR170W 306 nt2.12□□□□□ -2.07
CTK1Q03957 YBR174CYBR174C 315 nt2.12□□□□□ -2.07
CTK1Q03957 TFC8YPL007C 1767 nt2.12□□□□□ -2.07
CTK1Q03957 RAD34YDR314C 2079 nt2.11□□□□□ -2.07
CTK1Q03957 EDS1YBR033W 2760 nt2.11□□□□□ -2.07
CTK1Q03957 ZIP1YDR285W 2628 nt2.11□□□□□ -2.07
CTK1Q03957 TRL1YJL087C 2484 nt2.11□□□□□ -2.07
CTK1Q03957 YDR341CYDR341C 1824 nt2.1□□□□□ -2.07
CTK1Q03957 NUP170YBL079W 4509 nt2.1□□□□□ -2.07
CTK1Q03957 IRC8YJL051W 2469 nt2.1□□□□□ -2.07
CTK1Q03957 ZIP2YGL249W 2115 nt2.1□□□□□ -2.07
CTK1Q03957 ECM12YHR021W-A 456 nt2.1□□□□□ -2.07
CTK1Q03957 RPS25BYLR333C 327 nt2.1□□□□□ -2.07
CTK1Q03957 MCM10YIL150C 1716 nt2.1□□□□□ -2.07
CTK1Q03957 CHC1YGL206C 4962 nt2.1□□□□□ -2.07
CTK1Q03957 CSF1YLR087C 8877 nt2.1□□□□□ -2.07
CTK1Q03957 RTT107YHR154W 3213 nt2.1□□□□□ -2.07
CTK1Q03957 MSH5YDL154W 2706 nt2.09□□□□□ -2.07
CTK1Q03957 UTP22YGR090W 3714 nt2.09□□□□□ -2.07
CTK1Q03957 DNF1YER166W 4716 nt2.09□□□□□ -2.08
CTK1Q03957 INO80YGL150C 4470 nt2.09□□□□□ -2.08
CTK1Q03957 NOC3YLR002C 1992 nt2.09□□□□□ -2.08
CTK1Q03957 APL2YKL135C 2181 nt2.08□□□□□ -2.08
CTK1Q03957 BRP1YGL007W 378 nt2.08□□□□□ -2.08
CTK1Q03957 MAD1YGL086W 2250 nt2.08□□□□□ -2.08
CTK1Q03957 SAS3YBL052C 2496 nt2.08□□□□□ -2.08
CTK1Q03957 YBL005W-BYBL005W-B 5268 nt2.07□□□□□ -2.08
CTK1Q03957 RPL31AYDL075W 342 nt2.07□□□□□ -2.08
CTK1Q03957 TIM9YEL020W-A 264 nt2.07□□□□□ -2.08
CTK1Q03957 YNL170WYNL170W 396 nt2.07□□□□□ -2.08
CTK1Q03957 YOR108C-AYOR108C-A 210 nt2.07□□□□□ -2.08
CTK1Q03957 SYH1YPL105C 2550 nt2.07□□□□□ -2.08
CTK1Q03957 SAP185YJL098W 3177 nt2.07□□□□□ -2.08
CTK1Q03957 TOF1YNL273W 3717 nt2.07□□□□□ -2.08
CTK1Q03957 YOR343W-BYOR343W-B 5313 nt2.06□□□□□ -2.08
CTK1Q03957 DCP2YNL118C 2913 nt2.06□□□□□ -2.08
CTK1Q03957 ULI1YFR026C 510 nt2.06□□□□□ -2.08
CTK1Q03957 YKR075W-AYKR075W-A 270 nt2.06□□□□□ -2.08
CTK1Q03957 MAK10YEL053C 2202 nt2.06□□□□□ -2.08
CTK1Q03957 UBP1YDL122W 2430 nt2.05□□□□□ -2.08
CTK1Q03957 RPL37BYDR500C 267 nt2.05□□□□□ -2.08
CTK1Q03957 YHR180W-AYHR180W-A 183 nt2.05□□□□□ -2.08
CTK1Q03957 YKL165C-AYKL165C-A 234 nt2.05□□□□□ -2.08
CTK1Q03957 COF1YLL050C 432 nt2.05□□□□□ -2.08
CTK1Q03957 CDC60YPL160W 3273 nt2.04□□□□□ -2.08
CTK1Q03957 PAU3YCR104W 375 nt2.04□□□□□ -2.08
CTK1Q03957 ELG1YOR144C 2376 nt2.04□□□□□ -2.08
CTK1Q03957 YPR097WYPR097W 3222 nt2.04□□□□□ -2.08
CTK1Q03957 snR52snR52 92 nt2.04□□□□□ -2.08
CTK1Q03957 YJL052C-AYJL052C-A 120 nt2.03□□□□□ -2.08
CTK1Q03957 YOR072W-BYOR072W-B 162 nt2.03□□□□□ -2.08
CTK1Q03957 YOR345CYOR345C 351 nt2.03□□□□□ -2.08
CTK1Q03957 BNI1YNL271C 5862 nt2.03□□□□□ -2.08
CTK1Q03957 UFD4YKL010C 4452 nt2.03□□□□□ -2.08
CTK1Q03957 MLH3YPL164C 2148 nt2.03□□□□□ -2.08
CTK1Q03957 LRE1YCL051W 1752 nt2.03□□□□□ -2.09
CTK1Q03957 PIG1YLR273C 1947 nt2.02□□□□□ -2.09
CTK1Q03957 YFR016CYFR016C 3702 nt2.02□□□□□ -2.09
CTK1Q03957 YCR087C-AYCR087C-A 462 nt2.01□□□□□ -2.09
CTK1Q03957 SDH6YDR379C-A 240 nt2□□□□□ -2.09
CTK1Q03957 YIR044CYIR044C 186 nt2□□□□□ -2.09
CTK1Q03957 YOR381W-AYOR381W-A 168 nt2□□□□□ -2.09
CTK1Q03957 FKS1YLR342W 5631 nt1.99□□□□□ -2.09
CTK1Q03957 HIR3YJR140C 4947 nt1.99□□□□□ -2.09
CTK1Q03957 AGC1YPR021C 2709 nt1.99□□□□□ -2.09
CTK1Q03957 RPL33BYOR234C 324 nt1.99□□□□□ -2.09
CTK1Q03957 STH1YIL126W 4080 nt1.99□□□□□ -2.09
CTK1Q03957 HSL1YKL101W 4557 nt1.99□□□□□ -2.09
CTK1Q03957 YLL007CYLL007C 1998 nt1.99□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms