Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK3Q00526 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.83■□□□□ 0.77
CDK3Q00526 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CDK3Q00526 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDK3Q00526 AL158047.1-201ENST00000445918 881 ntBASIC19.83■□□□□ 0.77
CDK3Q00526 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK3Q00526 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK3Q00526 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.83■□□□□ 0.77
CDK3Q00526 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.83■□□□□ 0.77
CDK3Q00526 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDK3Q00526 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.77
CDK3Q00526 AC066615.1-201ENST00000640911 628 ntBASIC19.83■□□□□ 0.77
CDK3Q00526 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.83■□□□□ 0.76
CDK3Q00526 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK3Q00526 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK3Q00526 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK3Q00526 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CDK3Q00526 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.82■□□□□ 0.76
CDK3Q00526 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
CDK3Q00526 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK3Q00526 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK3Q00526 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK3Q00526 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CDK3Q00526 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CDK3Q00526 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDK3Q00526 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 C1QBPP2-201ENST00000528754 825 ntBASIC19.81■□□□□ 0.76
CDK3Q00526 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK3Q00526 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDK3Q00526 MTDHP1-201ENST00000605323 784 ntBASIC19.81■□□□□ 0.76
CDK3Q00526 AL359736.2-201ENST00000621992 437 ntBASIC19.81■□□□□ 0.76
CDK3Q00526 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.81■□□□□ 0.76
CDK3Q00526 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK3Q00526 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK3Q00526 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 KRT8P17-201ENST00000453110 1448 ntBASIC19.8■□□□□ 0.76
CDK3Q00526 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK3Q00526 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDK3Q00526 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK3Q00526 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.8■□□□□ 0.76
CDK3Q00526 RPPH1-201ENST00000516869 333 ntBASIC19.8■□□□□ 0.76
CDK3Q00526 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK3Q00526 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.8■□□□□ 0.76
CDK3Q00526 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.8■□□□□ 0.76
CDK3Q00526 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDK3Q00526 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDK3Q00526 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDK3Q00526 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CDK3Q00526 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.79■□□□□ 0.76
CDK3Q00526 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK3Q00526 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK3Q00526 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.79■□□□□ 0.76
CDK3Q00526 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.79■□□□□ 0.76
CDK3Q00526 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CDK3Q00526 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDK3Q00526 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms