Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 PGM5P4-201ENST00000421970 445 ntBASIC16.81■□□□□ 0.28
HLA-DRB3P79483 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 MYCNOS-205ENST00000641950 531 ntBASIC16.81■□□□□ 0.28
HLA-DRB3P79483 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DRB3P79483 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 AC087289.5-201ENST00000586076 3175 ntBASIC16.8■□□□□ 0.28
HLA-DRB3P79483 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DRB3P79483 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 KRT18P61-201ENST00000585825 1298 ntBASIC16.79■□□□□ 0.28
HLA-DRB3P79483 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 BX119927.1-201ENST00000636596 1552 ntBASIC16.79■□□□□ 0.28
HLA-DRB3P79483 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DRB3P79483 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.78■□□□□ 0.28
HLA-DRB3P79483 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HLA-DRB3P79483 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms