Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.69■□□□□ 0.42
NKX6-1P78426 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.69■□□□□ 0.42
NKX6-1P78426 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NKX6-1P78426 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.69■□□□□ 0.42
NKX6-1P78426 CYP21A1P-202ENST00000354927 1481 ntBASIC17.69■□□□□ 0.42
NKX6-1P78426 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.68■□□□□ 0.42
NKX6-1P78426 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX6-1P78426 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX6-1P78426 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NKX6-1P78426 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 MIR1224-201ENST00000408193 85 ntBASIC17.68■□□□□ 0.42
NKX6-1P78426 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.68■□□□□ 0.42
NKX6-1P78426 KRT17P3-201ENST00000420566 1262 ntBASIC17.68■□□□□ 0.42
NKX6-1P78426 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.68■□□□□ 0.42
NKX6-1P78426 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
NKX6-1P78426 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.68■□□□□ 0.42
NKX6-1P78426 AC008403.3-201ENST00000598924 454 ntBASIC17.68■□□□□ 0.42
NKX6-1P78426 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
NKX6-1P78426 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX6-1P78426 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.68■□□□□ 0.42
NKX6-1P78426 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NKX6-1P78426 KRT17P1-201ENST00000399211 1546 ntBASIC17.67■□□□□ 0.42
NKX6-1P78426 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NKX6-1P78426 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NKX6-1P78426 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.67■□□□□ 0.42
NKX6-1P78426 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.67■□□□□ 0.42
NKX6-1P78426 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.67■□□□□ 0.42
NKX6-1P78426 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX6-1P78426 HLA-B-256ENST00000639848 1089 ntBASIC17.67■□□□□ 0.42
NKX6-1P78426 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.67■□□□□ 0.42
NKX6-1P78426 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.67■□□□□ 0.42
NKX6-1P78426 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NKX6-1P78426 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NKX6-1P78426 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.66■□□□□ 0.42
NKX6-1P78426 AC026310.3-201ENST00000625186 2373 ntBASIC17.66■□□□□ 0.42
NKX6-1P78426 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NKX6-1P78426 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 KRT18P68-201ENST00000392293 1000 ntBASIC17.66■□□□□ 0.42
NKX6-1P78426 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.66■□□□□ 0.42
NKX6-1P78426 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.66■□□□□ 0.42
NKX6-1P78426 REXO1L12P-201ENST00000622156 912 ntBASIC17.66■□□□□ 0.42
NKX6-1P78426 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.66■□□□□ 0.42
NKX6-1P78426 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.66■□□□□ 0.42
NKX6-1P78426 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NKX6-1P78426 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NKX6-1P78426 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.66■□□□□ 0.42
NKX6-1P78426 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NKX6-1P78426 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.66■□□□□ 0.42
NKX6-1P78426 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NKX6-1P78426 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX6-1P78426 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NKX6-1P78426 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NKX6-1P78426 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX6-1P78426 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.65■□□□□ 0.42
NKX6-1P78426 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NKX6-1P78426 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.65■□□□□ 0.42
NKX6-1P78426 AL589743.5-201ENST00000616611 1050 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms