Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.69■□□□□ 0.42
LSM6P62312 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
LSM6P62312 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSM6P62312 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM6P62312 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM6P62312 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.68■□□□□ 0.42
LSM6P62312 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LSM6P62312 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 BX119927.1-201ENST00000636596 1552 ntBASIC17.68■□□□□ 0.42
LSM6P62312 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM6P62312 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM6P62312 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.68■□□□□ 0.42
LSM6P62312 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSM6P62312 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LSM6P62312 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LSM6P62312 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 CDCA4P2-201ENST00000441182 718 ntBASIC17.67■□□□□ 0.42
LSM6P62312 AC026185.1-201ENST00000445748 174 ntBASIC17.67■□□□□ 0.42
LSM6P62312 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.67■□□□□ 0.42
LSM6P62312 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.67■□□□□ 0.42
LSM6P62312 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
LSM6P62312 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSM6P62312 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
LSM6P62312 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LSM6P62312 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.66■□□□□ 0.42
LSM6P62312 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LSM6P62312 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 AL355472.2-201ENST00000422958 438 ntBASIC17.66■□□□□ 0.42
LSM6P62312 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.66■□□□□ 0.42
LSM6P62312 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.66■□□□□ 0.42
LSM6P62312 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.66■□□□□ 0.42
LSM6P62312 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSM6P62312 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSM6P62312 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.65■□□□□ 0.42
LSM6P62312 PTBP1P-201ENST00000554374 1601 ntBASIC17.65■□□□□ 0.42
LSM6P62312 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.65■□□□□ 0.42
LSM6P62312 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LSM6P62312 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSM6P62312 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.65■□□□□ 0.42
LSM6P62312 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM6P62312 AC112907.3-201ENST00000577781 2400 ntBASIC17.65■□□□□ 0.42
LSM6P62312 AC093787.1-201ENST00000450396 207 ntBASIC17.65■□□□□ 0.42
LSM6P62312 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.65■□□□□ 0.42
LSM6P62312 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LSM6P62312 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.65■□□□□ 0.42
LSM6P62312 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSM6P62312 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.64■□□□□ 0.42
LSM6P62312 KRT8P17-201ENST00000453110 1448 ntBASIC17.64■□□□□ 0.42
LSM6P62312 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSM6P62312 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSM6P62312 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
LSM6P62312 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms