Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.18■□□□□ 0.98
USP46P62068 AC120498.8-201ENST00000614275 531 ntBASIC21.18■□□□□ 0.98
USP46P62068 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP46P62068 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP46P62068 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP46P62068 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.18■□□□□ 0.98
USP46P62068 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
USP46P62068 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.17■□□□□ 0.98
USP46P62068 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 PEX7-202ENST00000367756 680 ntTSL 3 BASIC21.17■□□□□ 0.98
USP46P62068 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP46P62068 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 AC093827.2-201ENST00000512654 315 ntBASIC21.17■□□□□ 0.98
USP46P62068 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 RN7SL471P-201ENST00000580476 299 ntBASIC21.17■□□□□ 0.98
USP46P62068 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 AL359736.2-201ENST00000621992 437 ntBASIC21.17■□□□□ 0.98
USP46P62068 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
USP46P62068 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP46P62068 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.16■□□□□ 0.98
USP46P62068 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
USP46P62068 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
USP46P62068 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.16■□□□□ 0.98
USP46P62068 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
USP46P62068 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
USP46P62068 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
USP46P62068 AC007225.1-201ENST00000566331 1836 ntBASIC21.15■□□□□ 0.98
USP46P62068 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
USP46P62068 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP46P62068 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP46P62068 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
USP46P62068 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP46P62068 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
USP46P62068 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.15■□□□□ 0.98
USP46P62068 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.15■□□□□ 0.98
USP46P62068 AL390719.1-204ENST00000412397 1219 ntBASIC21.15■□□□□ 0.98
USP46P62068 C1QBPP2-201ENST00000528754 825 ntBASIC21.15■□□□□ 0.98
USP46P62068 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
USP46P62068 PTBP1P-201ENST00000554374 1601 ntBASIC21.15■□□□□ 0.98
USP46P62068 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.15■□□□□ 0.98
USP46P62068 AC073130.3-201ENST00000624389 2278 ntBASIC21.15■□□□□ 0.98
USP46P62068 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP46P62068 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP46P62068 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.14■□□□□ 0.98
USP46P62068 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP46P62068 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
USP46P62068 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.14■□□□□ 0.97
USP46P62068 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP46P62068 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP46P62068 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
USP46P62068 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.14■□□□□ 0.97
USP46P62068 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP46P62068 RPPH1-201ENST00000516869 333 ntBASIC21.14■□□□□ 0.97
USP46P62068 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
USP46P62068 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.14■□□□□ 0.97
USP46P62068 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.14■□□□□ 0.97
USP46P62068 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.14■□□□□ 0.97
USP46P62068 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
USP46P62068 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.13■□□□□ 0.97
USP46P62068 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
USP46P62068 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.13■□□□□ 0.97
USP46P62068 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.13■□□□□ 0.97
USP46P62068 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
USP46P62068 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
USP46P62068 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
USP46P62068 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.13■□□□□ 0.97
USP46P62068 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
USP46P62068 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
USP46P62068 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
USP46P62068 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.12■□□□□ 0.97
USP46P62068 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
USP46P62068 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms