Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.76■□□□□ 0.91
EIF3EP60228 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.76■□□□□ 0.91
EIF3EP60228 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 AC068338.2-201ENST00000563278 1430 ntBASIC20.76■□□□□ 0.91
EIF3EP60228 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
EIF3EP60228 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 BX119927.1-201ENST00000636596 1552 ntBASIC20.76■□□□□ 0.91
EIF3EP60228 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EIF3EP60228 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.75■□□□□ 0.91
EIF3EP60228 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.75■□□□□ 0.91
EIF3EP60228 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
EIF3EP60228 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
EIF3EP60228 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.75■□□□□ 0.91
EIF3EP60228 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.75■□□□□ 0.91
EIF3EP60228 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EIF3EP60228 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
EIF3EP60228 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
EIF3EP60228 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
EIF3EP60228 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.75■□□□□ 0.91
EIF3EP60228 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.74■□□□□ 0.91
EIF3EP60228 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
EIF3EP60228 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EIF3EP60228 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.74■□□□□ 0.91
EIF3EP60228 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
EIF3EP60228 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EIF3EP60228 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.74■□□□□ 0.91
EIF3EP60228 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EIF3EP60228 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.74■□□□□ 0.91
EIF3EP60228 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.74■□□□□ 0.91
EIF3EP60228 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EIF3EP60228 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
EIF3EP60228 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 AL691432.2-201ENST00000607222 2038 ntBASIC20.73■□□□□ 0.91
EIF3EP60228 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
EIF3EP60228 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 MCRIP2P1-201ENST00000394346 511 ntBASIC20.73■□□□□ 0.91
EIF3EP60228 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.73■□□□□ 0.91
EIF3EP60228 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
EIF3EP60228 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.73■□□□□ 0.91
EIF3EP60228 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.73■□□□□ 0.91
EIF3EP60228 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.73■□□□□ 0.91
EIF3EP60228 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
EIF3EP60228 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EIF3EP60228 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.73■□□□□ 0.91
EIF3EP60228 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.72■□□□□ 0.91
EIF3EP60228 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3EP60228 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3EP60228 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3EP60228 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
EIF3EP60228 AL162430.1-201ENST00000480705 870 ntBASIC20.72■□□□□ 0.91
EIF3EP60228 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3EP60228 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.72■□□□□ 0.91
EIF3EP60228 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3EP60228 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3EP60228 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EIF3EP60228 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms