Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.5■■□□□ 1.03
CDH8P55286 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.5■■□□□ 1.03
CDH8P55286 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.5■■□□□ 1.03
CDH8P55286 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH8P55286 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH8P55286 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH8P55286 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.5■■□□□ 1.03
CDH8P55286 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDH8P55286 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.49■■□□□ 1.03
CDH8P55286 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH8P55286 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH8P55286 AC006557.6-201ENST00000623071 864 ntBASIC21.49■■□□□ 1.03
CDH8P55286 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH8P55286 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.49■■□□□ 1.03
CDH8P55286 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH8P55286 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
CDH8P55286 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CDH8P55286 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH8P55286 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH8P55286 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH8P55286 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH8P55286 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH8P55286 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.48■■□□□ 1.03
CDH8P55286 UNC93B5-201ENST00000530315 699 ntBASIC21.48■■□□□ 1.03
CDH8P55286 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH8P55286 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH8P55286 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH8P55286 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH8P55286 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH8P55286 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH8P55286 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH8P55286 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH8P55286 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CDH8P55286 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH8P55286 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
CDH8P55286 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH8P55286 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.47■■□□□ 1.03
CDH8P55286 AC005829.2-201ENST00000571422 1056 ntBASIC21.47■■□□□ 1.03
CDH8P55286 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDH8P55286 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH8P55286 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDH8P55286 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH8P55286 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.47■■□□□ 1.03
CDH8P55286 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
CDH8P55286 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH8P55286 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CDH8P55286 TSPY20P-201ENST00000450910 630 ntBASIC21.46■■□□□ 1.03
CDH8P55286 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.46■■□□□ 1.03
CDH8P55286 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH8P55286 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
CDH8P55286 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH8P55286 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CDH8P55286 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH8P55286 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CDH8P55286 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH8P55286 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.45■■□□□ 1.02
CDH8P55286 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.45■■□□□ 1.02
CDH8P55286 AC023632.3-201ENST00000521633 145 ntBASIC21.45■■□□□ 1.02
CDH8P55286 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.45■■□□□ 1.02
CDH8P55286 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 AL162377.1-201ENST00000618844 1793 ntBASIC21.45■■□□□ 1.02
CDH8P55286 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH8P55286 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms