Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF140P52738 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.08■□□□□ 0.8
ZNF140P52738 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ZNF140P52738 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.08■□□□□ 0.8
ZNF140P52738 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF140P52738 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ZNF140P52738 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC20.07■□□□□ 0.8
ZNF140P52738 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
ZNF140P52738 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
ZNF140P52738 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZNF140P52738 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
ZNF140P52738 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF140P52738 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.07■□□□□ 0.8
ZNF140P52738 AC091874.3-201ENST00000512672 1195 ntBASIC20.07■□□□□ 0.8
ZNF140P52738 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.07■□□□□ 0.8
ZNF140P52738 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF140P52738 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF140P52738 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF140P52738 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ZNF140P52738 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZNF140P52738 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ZNF140P52738 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZNF140P52738 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF140P52738 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF140P52738 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF140P52738 MIR4758-201ENST00000577688 71 ntBASIC20.06■□□□□ 0.8
ZNF140P52738 MYC-209ENST00000641252 345 ntBASIC20.06■□□□□ 0.8
ZNF140P52738 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF140P52738 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF140P52738 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 KRT8P17-201ENST00000453110 1448 ntBASIC20.05■□□□□ 0.8
ZNF140P52738 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF140P52738 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.05■□□□□ 0.8
ZNF140P52738 AC023632.3-201ENST00000521633 145 ntBASIC20.05■□□□□ 0.8
ZNF140P52738 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF140P52738 AC142086.2-201ENST00000569753 217 ntBASIC20.05■□□□□ 0.8
ZNF140P52738 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF140P52738 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF140P52738 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
ZNF140P52738 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF140P52738 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF140P52738 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF140P52738 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZNF140P52738 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.04■□□□□ 0.8
ZNF140P52738 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF140P52738 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF140P52738 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF140P52738 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF140P52738 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF140P52738 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF140P52738 KRT8P20-201ENST00000423953 1409 ntBASIC20.03■□□□□ 0.8
ZNF140P52738 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF140P52738 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF140P52738 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF140P52738 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF140P52738 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF140P52738 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF140P52738 HLA-L-209ENST00000420110 1011 ntBASIC20.03■□□□□ 0.8
ZNF140P52738 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF140P52738 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF140P52738 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF140P52738 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms