Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLR2JP52435 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
POLR2JP52435 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR2JP52435 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR2JP52435 BX323043.1-201ENST00000641006 1765 ntBASIC19.22■□□□□ 0.67
POLR2JP52435 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
POLR2JP52435 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR2JP52435 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.22■□□□□ 0.67
POLR2JP52435 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.22■□□□□ 0.67
POLR2JP52435 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 AC123595.1-201ENST00000440769 1046 ntBASIC19.22■□□□□ 0.67
POLR2JP52435 TERF1P2-201ENST00000583350 1212 ntBASIC19.22■□□□□ 0.67
POLR2JP52435 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.22■□□□□ 0.67
POLR2JP52435 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLR2JP52435 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
POLR2JP52435 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 CDV3P1-201ENST00000471403 739 ntBASIC19.21■□□□□ 0.67
POLR2JP52435 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.21■□□□□ 0.67
POLR2JP52435 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.21■□□□□ 0.67
POLR2JP52435 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 AC005837.3-201ENST00000612163 286 ntBASIC19.21■□□□□ 0.67
POLR2JP52435 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
POLR2JP52435 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.21■□□□□ 0.67
POLR2JP52435 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.21■□□□□ 0.67
POLR2JP52435 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLR2JP52435 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.21■□□□□ 0.67
POLR2JP52435 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
POLR2JP52435 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.66
POLR2JP52435 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
POLR2JP52435 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.2■□□□□ 0.66
POLR2JP52435 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.2■□□□□ 0.66
POLR2JP52435 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR2JP52435 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR2JP52435 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.2■□□□□ 0.66
POLR2JP52435 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.2■□□□□ 0.66
POLR2JP52435 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
POLR2JP52435 AC019069.1-201ENST00000610008 1333 ntBASIC19.2■□□□□ 0.66
POLR2JP52435 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR2JP52435 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR2JP52435 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR2JP52435 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR2JP52435 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms