Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.19■□□□□ 0.66
HLCSP50747 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLCSP50747 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HLCSP50747 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.18■□□□□ 0.66
HLCSP50747 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 AC112907.3-201ENST00000577781 2400 ntBASIC19.18■□□□□ 0.66
HLCSP50747 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.18■□□□□ 0.66
HLCSP50747 AL138781.1-201ENST00000566567 1274 ntBASIC19.18■□□□□ 0.66
HLCSP50747 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.18■□□□□ 0.66
HLCSP50747 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 AL162377.1-201ENST00000618844 1793 ntBASIC19.18■□□□□ 0.66
HLCSP50747 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HLCSP50747 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
HLCSP50747 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HLCSP50747 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HLCSP50747 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 AC098818.2-201ENST00000564925 2320 ntBASIC19.17■□□□□ 0.66
HLCSP50747 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 MKRN4P-201ENST00000444706 1521 ntBASIC19.17■□□□□ 0.66
HLCSP50747 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.17■□□□□ 0.66
HLCSP50747 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.17■□□□□ 0.66
HLCSP50747 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 AC016405.3-201ENST00000607710 860 ntBASIC19.17■□□□□ 0.66
HLCSP50747 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
HLCSP50747 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HLCSP50747 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
HLCSP50747 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.17■□□□□ 0.66
HLCSP50747 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HLCSP50747 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLCSP50747 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLCSP50747 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLCSP50747 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLCSP50747 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.16■□□□□ 0.66
HLCSP50747 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.16■□□□□ 0.66
HLCSP50747 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.16■□□□□ 0.66
HLCSP50747 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.16■□□□□ 0.66
HLCSP50747 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLCSP50747 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.16■□□□□ 0.66
HLCSP50747 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.16■□□□□ 0.66
HLCSP50747 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HLCSP50747 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HLCSP50747 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HLCSP50747 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.15■□□□□ 0.66
HLCSP50747 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.15■□□□□ 0.66
HLCSP50747 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLCSP50747 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLCSP50747 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.15■□□□□ 0.66
HLCSP50747 AC093787.1-201ENST00000450396 207 ntBASIC19.15■□□□□ 0.66
HLCSP50747 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.15■□□□□ 0.66
HLCSP50747 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.15■□□□□ 0.66
HLCSP50747 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.15■□□□□ 0.66
HLCSP50747 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HLCSP50747 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
HLCSP50747 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HLCSP50747 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLCSP50747 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HLCSP50747 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms